Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005402.1 Kokia drynarioides strain JFW-HI SEQ_119409, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48993

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1975--2009
17
2.0
18
88
5
54
42
0
0
57
0.99
3480--3515
18
1.9
18
88
5
54
72
11
0
16
1.12
6109--6149
6
6.8
6
82
0
55
12
29
36
21
1.90
8047--8090
15
2.8
16
86
6
72
31
6
11
50
1.65
9375--9417
21
2.2
19
87
8
59
16
2
2
79
0.95
9437--9512
18
4.2
18
69
15
50
30
2
1
65
1.14
13144--13181
10
3.6
11
89
10
62
23
0
0
76
0.79
13665--14100
50
8.9
49
71
11
162
19
23
17
39
1.92
13828--14119
50
5.9
49
73
13
215
18
23
17
40
1.90
13668--14109
99
4.5
98
78
7
382
18
24
17
39
1.92
13668--14109
197
2.2
193
81
9
479
18
24
17
39
1.92
14541--14577
18
2.1
18
94
0
65
59
13
10
16
1.61
19346--19383
15
2.5
15
100
0
76
5
26
15
52
1.64
27220--27253
13
2.6
13
85
0
50
20
0
0
79
0.73
27619--27657
20
1.9
21
84
5
53
48
5
2
43
1.38
40258--40608
191
1.8
192
88
0
542
44
14
15
26
1.84
40967--41005
16
2.4
16
100
0
78
33
7
15
43
1.75
43656--43698
18
2.4
18
85
11
54
11
6
2
79
1.02
44229--44267
2
19.5
2
100
0
78
51
0
0
48
1.00
48784--48888
54
2.0
53
90
1
165
23
14
8
53
1.68
48785--48869
26
3.2
26
68
5
71
22
14
7
56
1.62
48785--48880
28
3.5
27
65
22
65
22
14
7
55
1.64

Tables:   1

The End!