Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005407.1 Kokia drynarioides strain JFW-HI SEQ_119416, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29481

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3859--4122
118
2.2
118
86
4
354
33
4
28
33
1.77
3859--4112
29
8.6
30
73
15
156
34
3
28
33
1.76
3859--4117
59
4.4
58
84
5
306
33
4
28
33
1.77
5221--5253
15
2.1
16
88
5
50
45
0
0
54
0.99
5998--6071
11
6.5
11
74
11
51
52
1
0
45
1.09
5991--6071
17
4.8
17
84
0
90
54
1
0
44
1.08
5973--6071
34
2.8
35
86
6
121
50
1
2
46
1.19
8577--8620
21
2.1
21
91
0
70
50
20
13
15
1.78
9195--9232
2
19.0
2
100
0
76
50
0
0
50
1.00
11945--11981
19
1.9
19
88
0
56
67
5
2
24
1.25
14450--14494
19
2.4
19
81
7
56
37
0
4
57
1.19
15295--15324
16
1.9
16
93
6
53
16
13
0
70
1.18
15290--15350
22
2.8
22
87
7
72
14
11
1
72
1.20
15304--15350
21
2.2
22
92
3
78
14
8
2
74
1.15
16887--16936
21
2.4
21
86
0
64
44
14
14
28
1.83
16898--16937
21
1.9
21
94
0
71
42
12
17
27
1.85
18107--18177
9
8.1
9
84
7
76
15
2
1
80
0.90
18109--18172
8
7.6
8
85
5
83
14
3
0
82
0.78
18109--18177
17
4.0
17
81
9
86
14
2
1
81
0.88
19199--19228
16
1.9
16
93
6
53
16
13
0
70
1.18
19194--19254
22
2.8
22
87
7
72
14
11
1
72
1.20
19208--19254
21
2.2
22
92
3
78
14
8
2
74
1.15
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20630--20670
18
2.3
18
84
12
50
68
4
0
26
1.10
22745--22816
36
2.0
36
91
2
119
38
6
15
38
1.74
22697--22866
87
2.0
86
91
1
277
37
11
11
39
1.78
26767--26838
24
3.0
24
85
2
90
25
19
19
36
1.95

Tables:   1

The End!