Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005422.1 Kokia drynarioides strain JFW-HI SEQ_119444, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56756

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14543--14576
2
17.0
2
87
0
50
50
2
2
44
1.32
22673--22727
16
3.4
16
85
7
67
43
1
7
47
1.41
24608--24805
59
3.4
59
76
10
158
37
23
1
38
1.62
24642--24973
29
11.5
28
71
14
185
36
22
2
38
1.66
24608--24978
58
6.4
57
80
8
308
35
23
2
38
1.68
24641--24973
87
3.8
86
81
9
354
36
22
2
38
1.66
32314--32341
7
4.0
7
100
0
56
28
14
14
42
1.84
33369--33403
2
17.5
2
88
11
54
51
2
0
45
1.16
33369--33412
10
4.3
11
88
8
58
50
6
0
43
1.29
39277--39309
2
16.5
2
100
0
66
51
48
0
0
1.00
41274--41303
15
2.0
15
93
0
51
56
6
6
30
1.51
44909--44949
20
2.0
20
85
0
55
46
7
0
46
1.30
44927--44990
28
2.3
27
77
15
69
48
1
1
48
1.20
45123--45147
5
5.0
5
100
0
50
20
0
0
80
0.72
53140--53220
42
1.9
42
100
0
162
44
13
14
27
1.83
53660--53718
27
2.1
30
75
18
72
62
1
0
35
1.05
53663--53718
28
2.1
28
86
6
80
64
1
0
33
1.04
54538--54568
6
5.2
6
100
0
62
32
35
16
16
1.91

Tables:   1

The End!