Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005426.1 Kokia drynarioides strain JFW-HI SEQ_119452, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40314

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4180--4255
11
6.8
11
70
24
52
55
2
1
40
1.22
4180--4255
37
2.1
36
85
11
102
55
2
1
40
1.22
5698--5745
20
2.3
21
82
7
62
12
31
18
37
1.88
7648--7813
25
6.6
25
80
2
172
24
15
25
34
1.94
7621--7796
50
3.5
50
80
6
194
24
14
24
36
1.92
7649--7813
75
2.2
75
85
0
213
24
15
25
34
1.94
13764--13960
35
5.5
36
79
7
186
24
19
21
34
1.97
13861--13994
40
3.5
40
74
10
152
24
20
20
34
1.97
13817--13992
75
2.3
75
91
1
282
23
18
21
36
1.95
14788--14831
2
22.0
2
100
0
88
50
0
0
50
1.00
21535--21611
20
3.8
20
78
10
84
10
19
23
46
1.80
25109--25152
22
2.0
22
82
8
54
34
6
4
54
1.47
26779--26827
20
2.3
22
83
13
59
63
10
0
26
1.26
26796--26845
20
2.5
20
90
3
75
60
8
0
32
1.26
26813--26867
19
2.9
18
83
8
65
52
5
0
41
1.24
28681--28741
30
2.0
31
84
9
81
16
3
14
65
1.40
28704--28786
36
2.3
35
84
11
107
13
3
18
65
1.41
28863--28909
21
2.2
21
82
14
53
78
4
8
8
1.07
29856--29917
14
4.5
14
77
18
67
45
0
0
54
0.99
29845--29933
41
2.2
40
90
4
135
48
0
0
51
1.00
29879--29909
11
2.9
11
95
4
55
41
0
0
58
0.98
30951--30980
12
2.5
12
94
0
51
53
0
33
13
1.40
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31001--31044
23
2.0
22
86
4
61
52
2
0
45
1.13
32910--32991
24
3.4
24
85
6
103
36
17
28
18
1.93
38443--38517
24
3.2
24
66
11
66
37
13
28
21
1.91
38450--38733
50
5.7
50
80
7
237
37
14
27
20
1.92
38484--38733
100
2.4
102
85
5
335
36
14
26
21
1.93
38484--38733
50
4.8
52
80
6
242
36
14
26
21
1.93
38694--38746
24
2.2
24
82
0
61
32
16
30
20
1.95
38484--38747
102
2.6
99
81
9
300
36
14
26
21
1.93
39955--39991
19
1.9
19
88
0
56
29
18
0
51
1.47

Tables:   1

The End!