Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005427.1 Kokia drynarioides strain JFW-HI SEQ_119456, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  92573

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
484--521
19
2.0
19
85
10
51
34
10
2
52
1.50
1174--1203
13
2.4
13
94
5
53
23
0
6
70
1.11
1595--1642
15
3.2
15
74
11
53
45
22
10
20
1.81
9503--9554
24
2.2
24
85
0
68
55
7
3
32
1.46
13495--13533
20
1.9
21
94
5
71
2
28
7
61
1.37
32713--32754
21
2.0
21
86
9
59
28
2
45
23
1.66
38883--38930
25
2.0
23
84
8
60
47
2
14
35
1.56
39257--39398
24
6.0
24
83
1
169
38
14
28
19
1.91
46762--46802
12
3.3
12
96
3
73
41
0
17
41
1.49
46762--46811
24
2.1
23
85
10
66
40
2
16
42
1.59
48023--48081
29
2.0
29
100
0
118
28
3
16
50
1.61
48757--48825
24
2.9
24
88
0
93
31
18
30
18
1.96
54830--54884
17
3.2
17
68
27
53
40
1
36
21
1.64
55074--55113
2
20.0
2
100
0
80
0
0
50
50
1.00
59140--59182
17
2.5
17
92
3
68
55
0
20
23
1.43
60140--60205
20
3.3
20
85
4
71
7
4
18
69
1.29
60216--60305
12
8.1
12
74
9
68
10
3
14
72
1.24
60193--60258
24
2.7
24
83
2
78
9
3
13
74
1.18
60139--60306
65
2.6
64
77
12
157
8
4
16
70
1.29
60224--60276
9
5.3
9
75
20
52
11
1
11
75
1.13
60219--60299
41
2.0
41
87
0
117
9
3
13
72
1.23
60267--60328
21
2.9
20
77
13
54
9
3
19
67
1.33
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60225--60319
41
2.2
41
83
9
111
11
3
14
70
1.28
67429--67470
14
3.1
14
77
16
52
50
2
0
47
1.14
72254--72292
13
3.1
13
77
7
53
23
0
10
66
1.22
73773--73804
16
1.9
17
93
6
57
34
3
18
43
1.66
74015--74069
25
2.2
26
86
3
76
12
20
18
49
1.79
74449--74543
47
2.0
47
97
0
181
32
11
12
43
1.79
87036--87080
15
3.0
14
84
15
63
62
0
37
0
0.96
89854--89940
36
2.4
36
88
5
124
20
21
22
34
1.97
90846--90937
42
2.2
42
86
0
121
21
25
32
20
1.98

Tables:   1

The End!