Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01005435.1 Kokia drynarioides strain JFW-HI SEQ_119464, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 1795
ACGTcount: A:0.37, C:0.11, G:0.17, T:0.36


Found at i:1654 original size:8 final size:8

Alignment explanation


    Indices: 1641--1666  Score: 52
    Period size: 8  Copynumber: 3.2  Consensus size: 8

       1631 AAATTGGCTT

                    
       1641 AAAAATTA
          1 AAAAATTA

                    
       1649 AAAAATTA
          1 AAAAATTA

                    
       1657 AAAAATTA
          1 AAAAATTA

              
       1665 AA
          1 AA

       1667 CATAAGTTGA


Statistics
Matches: 18,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   8   18  1.00

ACGTcount: A:0.77, C:0.00, G:0.00, T:0.23


Consensus pattern (8 bp):   
AAAAATTA
Done.