Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005454.1 Kokia drynarioides strain JFW-HI SEQ_119496, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31691

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
117--161
17
2.6
17
78
0
54
20
17
20
42
1.90
503--691
52
3.6
53
71
9
163
38
19
12
30
1.89
3488--3536
16
3.3
16
69
30
54
48
12
16
22
1.79
3470--3539
28
2.5
28
88
0
95
47
14
18
20
1.83
3535--3596
29
2.1
29
81
0
70
53
20
12
12
1.72
3666--3767
29
3.5
29
82
0
132
45
25
10
18
1.82
7988--8038
21
2.4
21
100
0
102
41
11
31
15
1.83
13078--13125
19
2.5
20
80
10
55
66
2
0
31
1.03
15676--15726
24
2.1
24
92
0
84
54
11
11
21
1.68
16351--16405
21
2.5
22
82
8
69
30
0
3
65
1.10
16355--16420
22
3.1
20
80
10
62
28
1
4
65
1.21
21817--21872
26
2.2
24
78
9
58
26
5
8
58
1.50
22022--22085
27
2.4
27
79
12
78
32
0
4
62
1.16
22512--22573
28
2.2
29
80
13
76
62
6
4
25
1.39
22518--22556
20
1.9
20
89
5
60
64
7
5
23
1.40
26907--26941
9
3.8
9
85
7
52
42
0
0
57
0.99
29606--29651
22
2.1
22
92
4
76
54
34
0
10
1.36
29694--29739
21
2.2
21
88
0
65
21
13
26
39
1.90

Tables:   1

The End!