Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01005460.1 Kokia drynarioides strain JFW-HI SEQ_119504, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 1708
ACGTcount: A:0.28, C:0.19, G:0.14, T:0.39


Found at i:930 original size:13 final size:13

Alignment explanation


    Indices: 912--937  Score: 52
    Period size: 13  Copynumber: 2.0  Consensus size: 13

        902 TTTTATTTAA

                         
        912 CCTTATAGAATTT
          1 CCTTATAGAATTT

                         
        925 CCTTATAGAATTT
          1 CCTTATAGAATTT

        938 AGAACTGCTG


Statistics
Matches: 13,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  13   13  1.00

ACGTcount: A:0.31, C:0.15, G:0.08, T:0.46


Consensus pattern (13 bp):   
CCTTATAGAATTT
Done.