Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005482.1 Kokia drynarioides strain JFW-HI SEQ_119539, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29082

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1544--1570
2
13.5
2
100
0
54
51
0
0
48
1.00
2843--2983
66
2.2
66
96
2
259
23
26
16
34
1.95
7036--7088
19
2.8
19
83
8
72
60
3
5
30
1.37
7044--7092
20
2.5
20
90
6
73
57
4
6
32
1.42
7017--7098
20
4.4
20
71
20
63
63
3
3
29
1.28
8531--8587
19
3.5
15
76
21
53
22
0
1
75
0.90
8669--8777
6
18.3
6
70
11
73
33
6
1
58
1.34
9073--9127
24
2.2
24
78
9
58
43
9
0
47
1.35
9351--9438
41
2.1
41
97
0
167
29
7
10
52
1.64
12244--12274
2
15.5
2
100
0
62
51
48
0
0
1.00
12581--12678
48
2.0
48
100
0
196
39
8
12
39
1.72
13502--13565
25
2.6
25
97
2
121
64
4
0
31
1.14
14387--14411
13
1.9
13
100
0
50
40
0
4
56
1.18
16579--16696
62
1.9
62
100
0
236
36
16
10
37
1.82
27738--27793
17
3.3
17
80
9
69
44
0
1
53
1.11
27837--27917
15
5.3
15
72
8
74
38
27
12
22
1.90
28391--28432
15
2.8
15
75
13
50
57
0
4
38
1.20
28462--28514
25
2.1
26
86
10
74
47
1
1
49
1.23
28789--28821
10
3.3
10
87
12
50
81
0
18
0
0.68

Tables:   1

The End!