Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005493.1 Kokia drynarioides strain JFW-HI SEQ_119555, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9012

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
505--832
30
11.1
30
83
9
383
35
29
2
31
1.72
509--837
59
5.5
58
86
6
412
37
29
2
31
1.72
509--840
89
3.7
88
86
6
420
37
29
2
31
1.71
515--920
59
6.9
59
81
7
223
35
28
3
32
1.73
2205--2589
58
6.6
58
78
11
317
39
3
25
31
1.74
2235--2521
59
4.8
59
78
10
282
39
4
25
30
1.75
2201--2425
118
1.9
117
82
10
280
39
4
25
30
1.77
2324--2453
30
4.5
28
73
18
106
38
4
27
29
1.77
2324--2490
29
5.6
30
68
17
107
41
4
25
28
1.76
2231--2520
118
2.5
116
82
7
311
39
4
25
31
1.76
2472--2669
29
6.9
30
76
16
159
35
3
26
34
1.72
2535--2672
59
2.3
60
83
9
160
33
5
24
36
1.80
5448--5528
31
2.7
30
80
3
99
37
2
9
50
1.49
6336--6424
25
3.7
24
70
14
76
43
0
4
51
1.21
8728--8770
19
2.4
18
85
14
54
37
2
2
58
1.24
8839--8891
24
2.2
25
83
10
65
45
3
0
50
1.19

Tables:   1

The End!