Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01005513.1 Kokia drynarioides strain JFW-HI SEQ_119590, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 755

Length: 1259
ACGTcount: A:0.45, C:0.09, G:0.09, T:0.36


Found at i:547 original size:12 final size:12

Alignment explanation


    Indices: 530--555  Score: 52
    Period size: 12  Copynumber: 2.2  Consensus size: 12

        520 GCTGATAATC

                        
        530 AATAATTGCTCT
          1 AATAATTGCTCT

                        
        542 AATAATTGCTCT
          1 AATAATTGCTCT

              
        554 AA
          1 AA

        556 ATTACTCTAC


Statistics
Matches: 14,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  12   14  1.00

ACGTcount: A:0.38, C:0.15, G:0.08, T:0.38


Consensus pattern (12 bp):   
AATAATTGCTCT
Done.