Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005554.1 Kokia drynarioides strain JFW-HI SEQ_119661, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  76577

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
986--1072
31
2.8
31
74
8
88
33
3
11
51
1.55
7392--7462
36
2.0
34
84
10
90
57
7
0
35
1.26
8851--8886
17
2.0
18
89
10
56
44
8
11
36
1.70
10837--10879
7
6.6
7
91
2
56
16
6
0
76
0.99
11883--11943
31
1.9
31
90
3
95
54
11
9
24
1.66
14062--14102
20
2.0
22
85
9
59
58
0
0
41
0.98
14337--14361
12
2.1
12
100
0
50
48
0
0
52
1.00
14945--14969
6
4.2
6
100
0
50
84
0
16
0
0.63
16522--16554
9
3.7
9
95
0
57
0
33
15
51
1.43
18799--18862
22
3.0
22
77
11
62
50
1
4
43
1.32
18848--18889
8
5.1
8
80
11
50
35
0
2
61
1.09
23605--24158
95
5.9
95
83
4
653
50
16
12
20
1.77
26208--26246
7
5.7
7
96
3
71
46
0
0
53
1.00
28695--28729
16
2.2
16
90
10
54
54
22
8
14
1.67
43733--43757
12
2.1
12
100
0
50
68
16
0
16
1.22
43752--43835
23
3.7
22
79
7
87
69
14
5
10
1.36
43840--43873
17
2.0
17
94
0
59
70
8
5
14
1.31
43852--43911
23
2.7
23
82
5
79
71
20
3
5
1.19
44606--44667
20
2.9
23
79
16
69
62
20
6
9
1.47
44615--44802
23
8.8
21
72
16
77
67
18
5
8
1.36
44629--44741
12
9.8
12
69
14
60
68
17
4
9
1.35
44681--44741
24
2.6
23
85
12
79
73
16
1
8
1.14
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44629--44741
33
3.3
34
77
8
95
68
17
4
9
1.35
44727--44813
20
4.3
19
79
17
95
68
16
6
8
1.35
46152--46186
18
1.9
18
94
0
61
25
0
14
60
1.35
46357--46399
21
2.1
20
86
4
59
30
0
13
55
1.39
49039--49179
45
3.0
48
88
8
204
31
25
20
21
1.98
49171--49216
21
2.2
21
96
0
83
23
39
15
21
1.92
49701--49752
26
2.0
26
88
0
77
59
3
1
34
1.27
52320--52358
19
2.1
19
95
0
69
66
20
0
12
1.24
54772--54844
16
4.7
15
73
17
51
39
16
2
41
1.63
54807--54845
15
2.5
16
87
4
53
35
7
5
51
1.53
59771--59807
2
18.5
2
100
0
74
0
48
0
51
1.00
64548--64574
6
4.5
6
100
0
54
51
14
0
33
1.43
64866--64916
6
8.5
6
95
0
93
50
17
0
31
1.46
68926--68953
7
4.0
7
100
0
56
42
14
14
28
1.84
72585--72612
13
2.2
13
100
0
56
28
0
0
71
0.86
75505--76024
199
2.7
192
79
7
567
35
18
22
23
1.95
76342--76412
17
4.2
17
77
0
70
39
5
4
50
1.45

Tables:   1

The End!