Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005571.1 Kokia drynarioides strain JFW-HI SEQ_119687, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  144606

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1811--1860
11
4.5
10
81
18
55
44
2
0
54
1.11
3238--3289
21
2.5
21
80
0
59
34
30
11
23
1.90
4046--4176
24
5.5
24
91
0
217
25
25
24
24
2.00
9684--9708
6
4.2
6
100
0
50
16
32
36
16
1.90
12987--13069
24
3.5
24
96
0
148
37
20
36
6
1.77
13822--13855
13
2.6
13
90
0
59
26
17
2
52
1.58
14776--14803
2
14.0
2
100
0
56
50
0
0
50
1.00
16103--16145
18
2.4
19
85
11
56
41
0
0
58
0.98
20403--20443
5
7.8
5
91
8
64
75
2
21
0
0.92
23523--23645
52
2.3
52
93
4
203
43
2
1
52
1.24
29327--29356
4
7.2
4
92
7
51
46
3
0
50
1.18
35462--35522
19
3.2
19
73
0
59
18
26
26
29
1.98
40657--40840
76
2.5
71
83
6
242
31
15
7
46
1.72
45844--45898
29
2.0
27
82
13
67
29
16
3
50
1.62
66274--66369
35
2.7
35
98
1
183
39
16
7
36
1.77
71283--71337
28
2.0
28
89
3
85
32
25
9
32
1.87
72776--72839
25
2.5
26
73
14
62
50
7
4
37
1.52
73203--73240
18
2.1
18
95
0
67
52
7
5
34
1.53
78295--78564
133
2.0
135
94
2
481
36
12
9
41
1.75
79122--79172
25
2.0
25
100
0
102
19
19
27
33
1.96
80075--80145
29
2.4
30
81
9
83
40
4
14
40
1.65
80075--80136
28
2.1
31
85
8
85
41
3
16
38
1.64
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
83471--83504
16
2.1
16
88
0
50
55
2
0
41
1.15
94180--94220
21
2.0
22
85
9
59
48
2
14
34
1.57
95941--95968
3
9.3
3
100
0
56
67
0
0
32
0.91
109632--109671
17
2.3
18
86
4
55
70
0
7
22
1.12
116727--116898
85
2.0
85
98
0
335
33
22
9
34
1.87
138698--138864
91
1.8
90
90
1
271
37
20
9
31
1.85

Tables:   1

The End!