Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005578.1 Kokia drynarioides strain JFW-HI SEQ_119697, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  213741

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3711--3753
18
2.4
18
88
7
61
41
0
2
55
1.12
6679--6766
10
8.7
10
84
10
117
39
3
0
56
1.16
12926--12970
17
2.6
17
89
3
63
51
2
2
44
1.26
12931--12970
17
2.3
18
91
4
64
55
0
2
42
1.13
13400--13432
17
2.1
17
88
11
52
27
0
0
72
0.85
19550--19579
1
30.0
1
100
0
60
100
0
0
0
0.00
31614--31656
17
2.6
16
78
10
50
34
9
4
51
1.55
33646--33672
14
1.9
14
100
0
54
51
7
0
40
1.30
49831--49856
13
2.0
13
100
0
52
30
0
0
69
0.89
52971--53018
23
2.1
23
84
0
60
52
4
2
41
1.32
59782--59813
3
10.7
3
100
0
64
31
0
0
68
0.90
73500--73543
21
2.0
23
86
8
65
43
11
0
45
1.40
73901--73925
12
2.1
12
100
0
50
44
16
24
16
1.86
77127--77355
51
4.5
51
84
4
264
30
14
24
31
1.94
81719--81759
19
2.2
19
86
4
57
14
2
17
65
1.37
84249--84283
18
1.9
18
88
0
52
65
8
8
17
1.44
84424--84475
22
2.5
20
77
20
52
59
9
5
25
1.51
86037--86108
30
2.4
29
79
9
72
48
1
1
48
1.18
86196--86222
7
3.9
7
100
0
54
14
14
29
40
1.86
91863--91931
31
2.2
31
82
5
86
33
8
10
47
1.68
95177--95205
4
7.2
4
100
0
58
27
0
48
24
1.51
96081--96106
11
2.4
11
100
0
52
23
0
7
69
1.14
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
101776--101844
28
2.4
29
82
2
86
11
26
24
37
1.89
106552--107347
396
2.0
397
98
0
1522
30
13
17
39
1.87
109775--109799
12
2.1
12
100
0
50
16
8
8
68
1.38
112545--112598
20
2.7
20
91
0
81
44
22
20
12
1.85
121168--121207
16
2.7
14
82
14
53
47
15
0
37
1.45
126940--126991
19
2.8
18
78
18
54
76
1
21
0
0.87
127280--127306
4
6.8
4
100
0
54
51
22
0
25
1.48
134302--134343
20
2.0
22
86
9
61
21
11
16
50
1.77
135254--135441
30
6.3
30
91
2
288
34
25
29
10
1.89
142262--142558
148
2.0
148
100
0
594
35
20
11
33
1.88
164452--164494
19
2.3
19
100
0
86
41
30
9
18
1.82
167186--167240
17
3.2
17
86
2
74
61
3
0
34
1.13
179587--179612
7
3.7
7
100
0
52
88
0
0
11
0.52
186483--186543
23
2.7
23
79
2
79
57
1
0
40
1.08
191284--191313
16
1.9
15
93
6
51
63
0
0
36
0.95
195166--195300
58
2.4
57
78
2
144
42
17
6
34
1.75
195202--195320
57
2.1
58
80
1
132
38
15
8
37
1.77
195523--195582
27
2.2
27
81
0
66
31
20
26
21
1.98
201828--201887
29
2.1
28
82
14
70
46
11
3
38
1.57
204627--204665
19
2.1
19
85
9
53
28
2
10
58
1.44

Tables:   1

The End!