Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005592.1 Kokia drynarioides strain JFW-HI SEQ_119720, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55412

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--26
2
13.0
2
100
0
52
50
0
0
50
1.00
711--757
18
2.5
19
96
3
87
53
12
8
25
1.67
4127--4250
41
3.0
41
95
0
221
31
24
17
26
1.97
18483--18591
27
4.0
27
100
0
218
26
18
11
44
1.83
23477--23508
12
2.7
12
95
0
55
0
34
0
65
0.93
33465--33539
24
3.1
24
90
0
105
28
25
20
26
1.99
40811--40960
72
2.1
72
88
0
219
35
23
13
28
1.92
40811--40940
36
3.6
36
90
0
206
35
23
15
26
1.94
41030--41266
69
3.4
69
89
1
332
46
13
5
34
1.67
41030--41272
23
10.6
23
85
1
290
46
12
5
34
1.66
43602--43723
43
2.9
43
81
2
140
36
13
27
23
1.92
44364--44414
24
2.1
24
100
0
102
29
11
21
37
1.89
44364--44422
24
2.5
24
91
5
84
28
11
22
37
1.89
44483--44536
21
2.6
21
82
5
65
33
11
24
31
1.90
50799--50996
41
4.8
40
80
8
184
36
11
25
26
1.89
50799--50995
82
2.4
82
82
6
229
37
11
24
26
1.89
51532--51590
24
2.5
24
85
0
82
28
10
22
38
1.86

Tables:   1

The End!