Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005604.1 Kokia drynarioides strain JFW-HI SEQ_119742, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40135

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
486--528
22
2.0
22
86
9
61
51
13
4
30
1.62
10660--10950
52
5.6
52
89
3
433
36
21
14
26
1.93
13713--13753
20
2.0
21
90
4
66
51
2
7
39
1.43
13903--13971
26
2.6
26
93
2
111
37
1
7
53
1.38
13923--13964
23
2.0
22
86
13
61
38
0
7
54
1.28
14150--14194
21
2.3
19
84
7
54
40
33
4
22
1.74
14577--14624
14
3.6
14
77
11
55
35
22
8
33
1.84
14579--14630
26
2.0
26
92
0
86
34
23
7
34
1.83
18253--18323
31
2.3
31
79
13
83
52
14
12
21
1.74
18751--18800
18
2.8
19
77
19
54
36
0
0
64
0.94
19501--19542
20
2.0
20
90
4
66
64
4
0
30
1.14
19742--19774
11
3.0
11
87
12
50
72
24
3
0
0.98
20719--20794
24
3.2
24
98
0
143
27
22
26
23
1.99
22627--22674
24
2.0
24
83
0
60
27
16
35
20
1.94
26186--26284
49
2.0
49
100
0
198
39
16
16
28
1.89
27459--28023
42
13.4
42
88
1
772
32
11
27
28
1.91
27459--28087
42
14.9
41
85
3
350
33
11
27
28
1.91
29239--29530
145
2.0
146
96
2
543
39
6
16
37
1.75
30938--30982
10
4.5
10
86
10
65
46
13
2
37
1.55
31819--31879
30
2.0
30
87
6
88
36
19
3
40
1.68
31849--31984
30
4.6
30
76
6
116
34
23
2
38
1.70
38411--38618
39
5.3
39
72
14
126
25
33
16
24
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38405--38830
78
5.4
77
80
3
442
25
31
17
25
1.97
38450--38815
39
9.4
38
69
16
187
25
31
17
25
1.97
38405--38830
235
1.8
234
85
2
595
25
31
17
25
1.97
38763--38984
39
5.7
39
68
9
121
27
28
18
25
1.98
38473--38984
78
6.5
79
76
6
208
26
29
17
25
1.98
38434--38984
156
3.5
154
79
6
486
27
29
17
25
1.98
40106--40135
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!