Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005621.1 Kokia drynarioides strain JFW-HI SEQ_119779, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42689

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4615--4861
53
4.6
53
85
2
334
34
20
16
28
1.94
5122--5157
19
1.9
19
88
5
56
38
16
8
36
1.79
6785--7171
199
1.9
199
92
1
650
32
14
8
44
1.76
8591--8847
37
6.9
37
80
0
253
16
19
30
33
1.94
13924--14051
37
3.4
36
80
5
139
15
21
28
34
1.94
15092--15116
11
2.3
11
100
0
50
24
20
36
20
1.95
15302--15431
50
2.5
52
85
5
174
39
3
9
47
1.54
15526--15689
82
2.0
82
98
0
319
39
12
15
32
1.84
16189--16213
4
6.2
4
100
0
50
24
0
0
76
0.80
23195--23230
18
2.0
18
94
0
63
52
11
19
16
1.73
24552--24805
126
2.0
125
95
0
454
35
18
16
29
1.93
32201--32236
18
2.0
18
100
0
72
33
11
27
27
1.91
34623--34739
58
2.0
58
91
0
189
33
9
15
41
1.79
34786--34826
13
3.1
13
89
3
55
53
4
7
34
1.50
35225--35267
18
2.5
17
85
14
61
37
4
4
53
1.43
35864--35888
12
2.1
12
100
0
50
40
0
0
60
0.97
36955--37012
24
2.5
24
85
2
82
27
13
17
41
1.87

Tables:   1

The End!