Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005630.1 Kokia drynarioides strain JFW-HI SEQ_119789, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8028

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
895--995
46
2.2
46
89
0
148
24
17
27
29
1.98
917--1006
46
2.0
46
84
4
119
27
21
20
31
1.98
1069--1249
76
2.4
76
81
4
231
23
21
17
38
1.93
1147--1510
123
3.0
123
86
2
498
22
20
17
39
1.92
1625--1721
42
2.3
42
76
3
97
18
20
16
44
1.87
1747--1977
49
4.7
49
70
5
153
19
24
18
37
1.94
2836--2887
3
18.7
3
77
18
51
0
25
0
75
0.81
2833--2890
6
9.8
6
82
14
50
0
22
0
77
0.77
2839--2902
12
5.3
12
78
12
53
0
23
0
76
0.79
2833--2901
17
4.3
15
74
15
59
0
23
0
76
0.78
3746--3791
24
2.0
23
87
12
67
0
19
2
78
0.86
3746--3795
5
10.6
5
82
8
61
0
20
2
78
0.86
3747--3802
28
1.9
30
85
7
80
0
16
7
76
0.99
3839--3900
15
4.4
14
82
17
67
0
22
0
77
0.77
3858--3884
4
6.8
4
100
0
54
0
22
0
77
0.76
3878--3911
16
2.2
15
89
5
50
2
23
2
70
1.15
7214--7344
29
4.4
29
83
7
158
40
0
22
37
1.54
7223--7344
59
2.1
59
85
3
165
38
0
22
39
1.54
7966--8000
2
17.5
2
93
0
61
48
0
2
48
1.16

Tables:   1

The End!