Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005661.1 Kokia drynarioides strain JFW-HI SEQ_119832, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  149614

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30284--30334
24
2.1
24
88
0
75
25
25
23
25
2.00
35138--35181
18
2.5
18
88
3
63
59
13
11
15
1.62
59228--59294
33
2.2
30
82
12
75
38
0
0
61
0.96
59230--59294
32
2.0
31
85
5
85
40
0
0
60
0.97
59228--59291
24
2.9
23
86
13
82
37
0
0
62
0.95
59250--59294
13
3.7
13
75
24
53
44
0
0
55
0.99
64842--65278
194
2.2
194
81
5
499
29
20
24
25
1.99
69052--69136
42
2.1
41
86
6
120
43
4
16
35
1.69
70445--70483
15
2.8
14
85
11
53
0
20
0
79
0.73
71012--71072
17
3.5
17
77
2
59
52
11
13
22
1.72
84775--84799
9
2.8
9
100
0
50
60
12
12
16
1.60
88460--88635
67
2.7
66
90
5
279
42
0
4
53
1.21
91103--91174
31
2.3
31
87
0
108
26
15
11
47
1.78
95542--95675
50
2.7
50
82
6
148
34
11
27
26
1.91
95709--96113
40
10.2
40
78
6
414
30
28
19
22
1.98
95709--96136
79
5.4
79
87
2
531
30
27
17
23
1.97
95709--96136
157
2.7
158
86
2
563
30
27
17
23
1.97
96651--96815
63
2.6
63
91
1
267
42
1
4
51
1.31
99783--99816
14
2.4
14
85
0
50
11
0
11
76
1.02
102900--102970
37
1.9
37
94
0
124
38
14
11
36
1.81
104650--104687
13
2.7
15
88
11
55
36
0
10
52
1.36
105372--105755
136
2.8
133
84
3
471
50
14
16
18
1.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
105959--105986
14
2.0
14
100
0
56
42
0
0
57
0.99
106334--106358
13
1.9
13
100
0
50
32
20
0
48
1.50
113844--113884
19
2.0
20
86
9
57
12
31
0
56
1.36
125199--125246
21
2.3
21
85
0
60
29
27
12
31
1.93
127479--127517
21
1.9
21
94
5
71
35
20
0
43
1.52
133004--133069
21
3.0
21
69
16
62
40
4
9
45
1.56
132988--133073
44
2.0
43
93
2
145
41
3
9
45
1.53
132995--133063
20
3.2
20
67
15
57
40
4
10
44
1.58
133168--133197
8
3.8
8
100
0
60
66
0
10
23
1.21
140666--140702
15
2.5
15
90
0
56
29
13
37
18
1.90
144989--145046
28
2.0
29
93
3
100
43
17
10
29
1.82
146439--146478
3
13.7
3
89
5
64
27
0
2
70
1.01
146489--146533
4
12.2
4
80
17
53
75
0
0
24
0.80
146489--146533
7
6.1
8
82
15
53
75
0
0
24
0.80
146489--146533
11
4.1
11
82
8
56
75
0
0
24
0.80
146489--146533
17
2.5
17
82
7
54
75
0
0
24
0.80
147488--147606
30
4.0
30
87
1
168
35
25
7
31
1.84
147616--147640
10
2.5
10
100
0
50
12
0
36
52
1.39
147644--147668
2
12.5
2
100
0
50
48
0
0
52
1.00

Tables:   1

The End!