Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005662.1 Kokia drynarioides strain JFW-HI SEQ_119834, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  138052

Tables:   1   

This is table  1  of  1  ( 53 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8518--8686
60
2.8
60
82
0
203
55
13
4
26
1.57
8496--8648
60
2.5
58
84
3
171
56
14
3
25
1.53
19195--19230
12
2.8
13
83
8
56
55
0
0
44
0.99
19195--19264
25
2.8
25
84
6
79
57
0
0
42
0.99
19210--19264
27
2.1
26
86
3
74
60
0
0
40
0.97
19217--19274
26
2.2
26
81
3
62
55
0
1
43
1.10
30439--30483
21
2.0
21
83
8
54
66
0
0
33
0.92
39687--39725
20
1.9
21
89
5
62
69
7
10
12
1.37
44000--44036
12
3.2
12
84
7
58
29
0
0
70
0.88
43992--44036
23
2.0
23
87
8
67
35
0
0
64
0.94
54652--54707
27
2.1
27
89
0
85
53
5
1
39
1.34
57116--57173
27
2.1
27
100
0
116
31
17
27
24
1.97
60866--60921
23
2.4
23
75
3
58
50
1
1
46
1.22
63102--63148
6
7.8
6
100
0
94
0
31
0
68
0.90
64964--65029
17
3.8
17
74
4
51
37
0
4
57
1.19
65133--65181
24
2.0
25
84
4
64
53
0
0
46
1.00
65134--65187
28
2.0
27
89
10
83
51
0
0
48
1.00
65133--65179
18
2.5
19
76
10
53
55
0
0
44
0.99
65167--65199
17
1.9
17
93
0
57
48
3
0
48
1.17
68519--68601
39
2.2
39
80
2
96
54
4
2
38
1.35
71893--71934
12
3.2
13
83
10
50
64
0
0
35
0.94
76087--76133
20
2.3
20
85
10
60
34
4
4
57
1.38
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
79464--79493
16
1.9
16
93
6
53
56
6
6
30
1.51
80413--80669
128
2.0
128
99
0
505
34
17
11
36
1.86
81024--81062
19
2.0
21
90
10
64
48
0
0
51
1.00
82197--82240
23
1.9
23
81
9
54
65
0
0
34
0.93
82529--82580
26
2.0
26
92
3
86
30
1
11
55
1.46
82529--82590
13
4.8
13
84
4
72
27
3
11
58
1.48
92879--92912
10
3.3
10
88
8
50
20
0
0
79
0.73
93718--93775
30
2.0
29
86
3
80
51
1
0
46
1.11
96061--96101
20
2.1
19
90
4
64
70
0
0
29
0.87
96502--96545
15
2.9
15
75
0
52
18
0
11
70
1.16
96605--96683
27
2.9
27
98
0
149
13
29
31
25
1.94
96821--96899
39
2.0
39
92
4
133
27
25
16
30
1.97
97548--97578
9
3.4
9
95
0
53
70
16
0
12
1.16
105403--105455
18
3.1
17
74
12
54
30
1
1
66
1.13
108687--108727
21
1.9
21
85
14
57
29
2
4
63
1.28
109420--109485
31
2.2
29
86
5
87
57
1
3
37
1.23
115668--115724
28
2.0
29
83
10
73
47
5
15
31
1.68
117253--117290
18
2.1
19
85
5
51
28
2
0
68
1.03
122353--122463
59
1.9
59
90
1
179
49
18
8
23
1.74
122353--122476
59
2.1
59
86
4
171
50
16
8
24
1.72
122369--122492
58
2.1
59
80
5
135
54
16
7
21
1.67
126849--126874
12
2.2
12
100
0
52
57
7
7
26
1.54
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
129837--129862
3
8.7
3
100
0
52
69
0
0
30
0.89
130085--130363
139
2.0
138
89
2
425
32
12
23
31
1.91
131910--131947
20
1.9
20
89
10
60
34
0
5
60
1.19
132048--132087
21
1.9
21
85
10
55
35
10
15
40
1.80
137138--137224
44
2.0
41
81
14
97
66
18
4
10
1.38
137246--137289
20
2.3
19
81
11
54
72
15
2
9
1.19
137238--137306
22
3.3
21
75
6
59
72
15
2
8
1.21
137270--137317
20
2.3
21
82
7
53
66
20
6
6
1.36
138015--138052
2
19.0
2
100
0
76
50
0
0
50
1.00

Tables:   1

The End!