Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005663.1 Kokia drynarioides strain JFW-HI SEQ_119836, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67614

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11055--11085
6
5.2
6
100
0
62
51
0
32
16
1.44
12993--13046
19
3.0
19
67
25
53
55
11
11
22
1.66
27167--27468
150
2.0
150
96
1
561
30
14
20
33
1.93
27757--27812
22
2.5
22
85
2
76
42
3
0
53
1.18
33460--33501
7
6.0
7
80
8
50
28
0
4
66
1.12
36523--36585
24
2.6
24
87
0
90
49
11
14
25
1.76
37410--37505
39
2.4
39
86
8
131
56
11
6
26
1.58
38250--38295
20
2.3
20
81
7
58
63
6
0
30
1.20
38444--38504
26
2.4
26
83
2
70
49
29
1
19
1.58
39784--40033
29
8.6
29
79
10
201
37
24
1
36
1.65
39784--40014
88
2.6
88
78
10
224
37
24
1
36
1.66
39954--40043
29
3.1
28
79
7
101
35
23
2
38
1.67
39903--40052
58
2.6
59
78
9
164
38
23
2
36
1.66
41774--41887
17
6.3
17
77
13
102
38
0
4
56
1.26
41780--41828
23
2.2
22
85
3
62
30
0
8
61
1.25
41808--41871
6
11.0
6
72
12
53
40
0
3
56
1.15
41774--41857
40
2.1
40
90
0
132
35
0
5
58
1.23
41792--41857
23
2.9
23
81
4
71
36
0
4
59
1.18
43667--43785
28
4.1
29
75
13
102
32
24
5
37
1.77
43690--44047
29
12.4
28
66
14
111
31
24
3
41
1.70
43690--44133
116
3.8
110
79
12
387
30
25
4
39
1.77
43732--44102
58
6.4
57
83
7
314
30
24
4
40
1.74
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43734--44157
115
3.7
115
81
9
327
30
25
4
39
1.76
45726--45764
18
2.0
21
85
14
57
38
7
5
48
1.54
49811--49849
18
2.2
18
86
9
53
46
0
2
51
1.14
56490--56522
18
1.9
18
88
11
52
54
0
3
42
1.15
56645--56674
15
1.9
16
93
6
53
56
0
0
43
0.99
67093--67135
21
2.0
21
95
0
77
30
30
20
18
1.97

Tables:   1

The End!