Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005666.1 Kokia drynarioides strain JFW-HI SEQ_119840, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  91252

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3627--3658
14
2.4
14
90
10
50
68
0
3
28
1.04
3632--3700
29
2.4
30
76
11
72
60
1
2
34
1.20
3731--3783
26
2.0
26
85
7
72
62
5
1
30
1.29
4364--4467
9
12.6
8
73
17
72
33
1
1
62
1.17
7180--7234
26
2.1
26
93
0
92
34
20
9
36
1.84
9560--9601
12
3.7
12
81
12
52
52
4
0
42
1.22
10117--10179
31
2.0
31
96
0
117
36
12
17
33
1.88
13218--13451
117
2.0
117
99
0
459
38
14
15
31
1.87
20163--20231
34
2.0
34
97
0
129
15
5
21
56
1.60
22641--22684
19
2.3
19
84
7
54
59
4
0
36
1.18
24066--24148
41
2.0
41
100
0
166
36
13
7
43
1.71
24122--24189
6
11.5
6
81
9
68
29
20
0
50
1.49
24141--24189
12
4.1
12
89
0
80
24
24
0
51
1.49
24122--24189
24
2.9
24
86
6
86
29
20
0
50
1.49
25169--25228
33
1.9
32
86
10
88
6
30
3
60
1.39
27286--27328
8
4.9
9
78
16
54
76
0
4
18
0.95
27286--27328
18
2.5
17
85
14
61
76
0
4
18
0.95
29843--29885
21
2.0
22
95
4
79
72
4
9
13
1.26
30680--30723
19
2.3
19
84
7
54
59
4
0
36
1.18
32516--32570
28
2.0
28
92
0
92
29
14
30
25
1.95
39852--39884
16
1.9
18
88
11
52
24
0
3
72
0.98
39839--39883
23
2.0
23
81
0
54
28
0
2
68
1.01
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40401--40439
19
2.0
20
85
5
53
38
0
5
56
1.22
40977--41015
18
2.2
18
86
9
53
79
2
10
7
1.02
53083--53112
2
15.0
2
100
0
60
0
50
0
50
1.00
61376--61600
120
1.9
120
100
0
450
34
10
26
28
1.89
72820--72877
31
1.9
29
82
6
71
44
5
3
46
1.42
76032--76064
2
16.5
2
93
0
57
48
0
3
48
1.17
84399--84439
18
2.3
18
87
8
57
24
4
2
68
1.22

Tables:   1

The End!