Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005669.1 Kokia drynarioides strain JFW-HI SEQ_119844, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49285

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
893--946
21
2.6
21
88
5
83
33
24
12
29
1.92
2520--2549
3
10.0
3
100
0
60
66
0
33
0
0.92
12812--12850
18
2.2
17
90
9
60
53
2
43
0
1.14
13919--13966
13
3.6
13
73
15
53
66
2
4
27
1.21
13921--13975
27
2.0
27
100
0
110
63
3
3
29
1.28
27225--27348
63
2.0
63
98
0
239
39
9
26
24
1.86
31988--32198
113
1.9
113
87
4
309
22
26
10
40
1.86
38404--38449
18
2.5
19
79
10
60
30
0
8
60
1.26
38706--38739
5
7.0
5
86
6
52
38
0
0
61
0.96
38802--38841
7
5.7
7
100
0
80
57
0
0
42
0.98
38862--39182
154
2.1
155
91
3
513
35
9
9
45
1.69
40313--40405
43
2.2
42
84
5
116
31
9
11
47
1.73
40990--41035
21
2.2
21
88
7
67
26
32
15
26
1.95
41263--41315
14
3.8
14
78
9
54
50
26
0
22
1.49
41271--41350
21
3.8
21
70
6
63
51
25
0
23
1.49
41323--41402
30
2.7
29
75
9
81
48
23
0
27
1.51
41278--41409
14
9.2
14
67
17
65
51
21
0
26
1.48
41323--41411
15
6.0
15
73
10
67
50
22
0
26
1.49
41321--41411
44
2.1
44
81
8
105
51
21
0
26
1.48
41372--41417
15
3.1
15
87
0
56
56
19
0
23
1.42
45445--45477
2
16.5
2
100
0
66
51
0
0
48
1.00
45805--45858
28
1.9
28
88
0
81
27
14
12
44
1.82
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46520--46557
14
2.8
14
88
4
51
47
0
0
52
1.00

Tables:   1

The End!