Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005675.1 Kokia drynarioides strain JFW-HI SEQ_119860, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19373

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--44
17
2.6
16
79
10
52
43
2
4
50
1.35
643--685
18
2.3
19
80
4
52
4
34
2
58
1.32
6068--6253
97
1.9
96
81
9
227
37
15
16
30
1.90
6473--6535
28
2.2
28
86
5
83
26
7
30
34
1.85
6488--6552
28
2.3
29
86
2
87
30
4
35
29
1.78
6515--6881
59
6.3
57
79
10
240
38
4
26
29
1.77
6696--6771
28
2.7
28
78
10
84
42
3
23
30
1.72
6724--6896
29
5.9
29
71
7
118
39
2
26
31
1.69
8508--8550
19
2.3
19
100
0
86
9
9
39
41
1.69
8619--8670
11
4.5
12
85
9
72
50
3
0
46
1.20
8620--8670
17
3.0
17
91
0
84
50
3
0
45
1.20
8619--8670
6
9.0
6
85
8
72
50
3
0
46
1.20
8845--8988
72
2.0
72
98
0
279
35
4
22
37
1.74
9526--9579
24
2.4
23
81
9
58
51
0
7
40
1.30
12487--12539
24
2.2
24
80
6
63
28
3
49
18
1.65
17597--17651
16
3.6
15
76
11
58
14
3
10
70
1.28
17597--17632
15
2.3
15
90
4
54
16
2
11
69
1.29
18978--19042
20
3.3
19
80
4
67
32
1
1
64
1.12

Tables:   1

The End!