Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005718.1 Kokia drynarioides strain JFW-HI SEQ_119948, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46330

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
576--615
22
1.9
20
90
10
62
32
0
7
60
1.25
591--627
18
2.1
17
90
5
56
29
0
2
67
1.04
14384--14424
22
1.9
21
85
5
55
56
0
0
43
0.99
14688--14757
30
2.4
30
80
7
72
25
12
11
50
1.74
19575--19618
20
2.3
19
88
7
63
70
0
2
27
0.99
19702--19771
22
3.2
22
81
4
79
58
0
1
40
1.07
20232--20287
22
2.5
21
83
13
60
50
0
1
48
1.11
20413--20462
25
2.0
25
84
11
66
32
6
0
62
1.20
23761--23827
21
3.2
21
78
4
73
20
8
38
31
1.84
23831--24037
42
4.9
42
79
3
184
25
8
42
23
1.81
23831--24016
63
3.0
63
78
0
192
26
8
42
23
1.81
23831--24017
21
8.9
21
80
0
140
26
8
42
23
1.81
23830--24058
21
10.9
21
78
3
133
25
8
42
23
1.82
23961--24130
21
8.1
21
80
3
80
22
10
41
25
1.85
24198--24342
42
3.5
41
83
3
166
26
13
39
20
1.90
24222--24343
21
5.8
21
84
5
133
28
15
36
18
1.92
30798--30828
16
1.9
16
93
0
53
32
6
22
38
1.80
32400--32459
31
1.9
31
93
0
102
46
13
5
35
1.65
34619--34665
18
2.6
18
80
13
51
34
2
2
61
1.20
41695--41809
60
1.9
60
96
1
214
45
12
19
23
1.83
43093--43140
21
2.4
19
76
10
51
56
14
2
27
1.50
43458--43576
37
3.4
36
65
20
99
38
10
0
50
1.42
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43488--43593
30
3.3
30
66
16
86
41
8
0
49
1.40
43472--43606
67
2.0
67
100
0
270
39
10
1
48
1.46
44739--44779
12
3.5
12
86
3
57
58
0
0
41
0.98
46294--46330
2
18.5
2
94
0
65
48
0
2
48
1.15

Tables:   1

The End!