Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005734.1 Kokia drynarioides strain JFW-HI SEQ_119972, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42639

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
723--784
24
2.6
24
82
10
65
40
24
9
25
1.85
6113--6303
29
6.4
29
80
11
194
39
0
23
37
1.55
6113--6303
30
6.4
30
80
11
191
39
0
23
37
1.55
10284--10485
52
3.9
52
85
3
264
32
26
14
27
1.95
10284--10487
105
2.0
104
85
4
277
31
25
14
27
1.95
11337--11377
20
2.0
20
90
9
66
34
26
0
39
1.57
13998--14137
30
4.6
30
82
7
160
38
1
22
37
1.64
14015--14137
59
2.1
60
84
7
162
39
1
22
36
1.64
14487--14542
29
1.9
29
81
0
67
35
14
1
48
1.54
19256--19297
22
1.9
22
90
9
68
19
9
21
50
1.75
25815--25844
2
15.0
2
100
0
60
50
0
0
50
1.00
29298--29348
20
2.4
21
80
12
59
60
7
0
31
1.25
33041--33070
2
15.0
2
100
0
60
0
0
50
50
1.00
33191--33259
4
16.5
4
82
8
84
75
0
24
0
0.81
33305--33333
12
2.3
13
94
5
51
31
0
0
68
0.89
33971--34018
16
3.2
16
74
17
57
60
6
0
33
1.22
35380--35572
97
2.0
97
81
8
223
38
14
17
30
1.89
35942--36035
30
3.1
30
76
10
111
41
6
21
30
1.78
35901--36126
59
3.8
59
84
8
275
39
3
23
33
1.71
35962--36209
29
8.5
28
70
12
135
39
2
24
33
1.70
36021--36209
88
2.2
87
86
4
256
39
2
24
34
1.67
36032--36280
29
8.5
29
71
12
100
38
2
24
35
1.68
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
36175--36279
30
3.6
27
73
15
66
38
1
22
37
1.66
36660--36690
11
2.8
11
100
0
62
16
19
38
25
1.92
37378--37422
21
2.1
21
88
8
65
37
0
0
62
0.96
37356--37496
72
2.0
71
98
1
273
25
7
4
62
1.41
37450--37566
3
39.0
3
87
6
112
34
5
0
58
1.28
37378--37566
72
2.6
72
83
8
208
30
6
2
60
1.35
38147--38232
17
4.9
17
76
9
84
52
4
3
39
1.39
38137--38237
6
17.2
6
69
11
66
50
3
2
42
1.36
38724--38808
43
2.0
43
86
4
118
30
11
10
47
1.74
39642--39687
21
2.1
22
88
4
67
50
21
2
26
1.60
42149--42194
24
1.9
24
100
0
92
17
17
19
45
1.85

Tables:   1

The End!