Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005743.1 Kokia drynarioides strain JFW-HI SEQ_119986, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67965

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4497--4562
30
2.2
30
83
0
78
45
1
3
50
1.26
16202--16280
32
2.5
32
83
4
90
36
0
10
53
1.35
17984--18010
2
13.5
2
100
0
54
48
0
0
51
1.00
20616--20831
107
2.0
107
100
0
432
32
12
18
36
1.89
27443--27490
16
3.1
16
77
14
55
16
6
12
64
1.46
29202--29263
28
2.2
28
88
0
88
29
9
30
30
1.89
29242--29523
59
4.8
59
85
5
263
37
4
26
30
1.77
29308--29557
30
8.6
29
74
18
166
39
3
24
32
1.73
29220--29498
29
9.7
29
71
19
115
36
5
26
31
1.78
31313--31359
6
8.0
6
83
4
60
55
2
0
42
1.12
31313--31387
17
4.4
17
82
1
96
56
4
0
40
1.18
31314--31376
12
5.4
12
74
14
60
55
4
0
39
1.21
31295--31387
34
2.7
35
84
1
116
53
3
1
41
1.24
31801--32205
49
8.3
48
73
8
311
17
25
18
38
1.92
31745--32227
97
5.0
97
85
2
569
17
25
18
38
1.92
31737--32201
146
3.2
144
72
11
403
18
24
18
38
1.93
36920--36963
18
2.4
19
84
7
63
4
34
2
59
1.30
44551--44604
23
2.5
23
85
8
69
42
0
1
55
1.10
44525--44585
3
19.7
3
86
6
86
36
0
1
62
1.05
45307--45363
17
3.4
17
80
7
71
56
3
1
38
1.27
47253--47302
24
2.1
24
84
0
64
44
2
10
44
1.49
48648--48735
30
2.9
30
96
1
158
32
7
13
45
1.73
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51434--52056
327
1.9
329
83
5
810
22
12
19
45
1.84
51416--52209
167
4.8
166
76
11
682
22
12
19
44
1.85
58323--58666
30
11.6
30
73
8
159
32
5
26
35
1.79
58478--58688
29
7.2
29
75
8
167
35
2
27
35
1.70
58478--58688
59
3.6
58
80
3
201
35
2
27
35
1.70
60695--60814
61
2.0
62
83
1
152
39
11
3
45
1.57
60991--61060
23
3.3
22
71
19
67
17
4
21
57
1.57
60991--61075
41
2.1
40
89
6
127
16
3
22
57
1.54
61199--61269
31
2.3
31
88
11
103
21
14
21
43
1.87

Tables:   1

The End!