Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005750.1 Kokia drynarioides strain JFW-HI SEQ_119998, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72629

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
963--996
9
3.8
9
88
11
52
79
0
0
20
0.73
4178--4220
22
2.0
22
90
0
68
34
6
11
46
1.67
7576--7611
18
2.0
18
94
0
63
52
2
0
44
1.15
7691--7738
25
1.9
25
86
0
69
62
0
0
37
0.95
7620--7918
93
3.3
91
86
7
401
52
8
7
31
1.61
7876--7923
23
2.1
22
84
3
60
66
2
2
29
1.14
8462--8493
6
5.3
6
92
0
55
21
50
12
15
1.77
13075--13125
17
3.1
16
78
13
50
35
1
0
62
1.06
13084--13124
17
2.3
19
87
8
59
29
2
0
68
1.03
13082--13125
18
2.6
16
82
13
52
34
2
0
63
1.07
20457--20514
27
2.2
26
81
12
64
43
6
5
44
1.53
24158--24235
17
4.5
17
79
7
86
43
1
2
52
1.23
24156--24235
34
2.3
34
85
6
108
43
1
2
52
1.22
24156--24238
6
14.3
6
70
16
59
44
1
2
51
1.22
24956--25047
3
30.0
3
93
4
157
66
0
0
33
0.92
25921--25988
22
3.2
21
79
8
57
10
8
16
64
1.48
25963--26009
20
2.3
20
85
3
67
10
8
17
63
1.49
25974--26041
33
2.1
32
83
5
84
7
5
19
67
1.36
25983--26065
33
2.4
34
86
7
107
8
4
16
69
1.31
26006--26132
24
5.6
21
71
18
69
8
3
18
69
1.30
29463--29504
1
42.0
1
92
0
57
92
0
0
4
0.31
29461--29504
23
2.0
22
100
0
79
88
0
0
9
0.47
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
29462--29511
23
2.2
23
88
0
73
86
0
4
8
0.66
34658--34776
53
2.2
53
83
6
139
42
10
20
27
1.84
47902--47929
3
9.3
3
100
0
56
35
0
32
32
1.58
53971--54008
20
1.9
20
88
0
58
60
7
21
10
1.54
58001--58183
92
2.0
92
97
0
348
22
22
13
40
1.90
59562--59591
2
15.0
2
92
0
51
0
46
0
53
1.00
71679--71724
23
2.0
23
83
8
58
41
10
15
32
1.82

Tables:   1

The End!