Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005753.1 Kokia drynarioides strain JFW-HI SEQ_120007, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54873

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2658--2701
20
2.2
20
91
0
70
13
20
34
31
1.92
3580--3628
21
2.4
20
83
6
62
42
14
20
22
1.88
3832--3869
19
2.0
20
89
5
60
39
0
0
60
0.97
11000--11033
17
2.1
17
94
5
61
35
11
0
52
1.38
11611--11655
19
2.4
19
81
7
56
35
0
6
57
1.25
12455--12484
15
1.9
16
93
6
53
23
10
0
66
1.21
12450--12510
22
2.8
22
90
7
90
21
8
0
70
1.13
20609--20766
83
1.9
83
90
2
255
44
12
15
28
1.82
22670--22711
8
5.2
8
77
11
50
26
0
2
71
0.98
25075--25109
12
2.9
12
86
0
52
42
0
57
0
0.99
29141--29191
21
2.4
22
83
6
70
64
0
0
35
0.94
34681--34719
17
2.3
17
86
0
51
61
2
7
28
1.37
35792--35843
27
1.9
27
88
0
77
23
21
30
25
1.99
35783--35850
27
2.5
26
74
9
64
23
22
30
23
1.99
47296--47329
17
2.0
17
88
0
50
50
26
2
20
1.63
48296--48453
29
5.4
29
77
3
147
50
10
17
22
1.75
48300--48446
58
2.5
58
80
3
179
50
10
17
22
1.75
51353--51417
33
2.0
33
87
6
96
41
0
16
41
1.49
52893--52931
18
2.2
18
85
0
51
28
15
7
48
1.72
53431--53503
17
4.4
17
87
1
103
43
0
2
53
1.15
53436--53503
6
11.8
6
72
20
56
44
0
2
52
1.16
53535--53590
15
3.7
15
85
0
85
41
26
14
17
1.88

Tables:   1

The End!