Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005770.1 Kokia drynarioides strain JFW-HI SEQ_120034, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55314

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
575--658
34
2.5
33
82
3
105
57
7
1
34
1.34
613--659
17
2.8
17
78
15
53
57
4
0
38
1.18
4793--4864
30
2.4
30
83
6
83
47
16
13
22
1.82
4943--4997
27
2.1
26
89
3
83
20
36
0
43
1.52
5785--5836
27
2.0
26
92
3
86
40
0
38
21
1.53
14599--14709
23
4.8
23
82
2
116
38
5
11
44
1.64
16876--16925
24
2.1
24
100
0
100
52
16
12
20
1.75
25260--25293
16
2.2
16
94
5
61
70
0
2
26
1.01
28262--28368
20
5.8
18
70
22
62
53
3
2
40
1.33
28294--28369
37
2.1
36
85
11
102
55
2
2
39
1.28
34518--34593
27
2.8
27
84
4
91
21
27
30
21
1.98
42518--42568
26
2.0
26
96
0
93
58
11
3
25
1.50
43021--43078
18
3.2
18
80
0
62
15
32
31
20
1.94
45201--45238
12
2.9
13
84
11
51
71
0
0
28
0.87
47983--48014
2
16.0
2
93
0
55
0
50
3
46
1.17
49071--49138
30
2.3
30
84
5
84
45
1
4
48
1.31
51690--51963
41
6.7
41
84
0
323
30
20
29
19
1.97
51692--52003
82
3.8
82
78
2
234
31
20
28
20
1.97
54480--54696
41
5.4
41
81
4
244
29
19
29
21
1.98
54480--54696
79
2.7
80
79
3
240
29
19
29
21
1.98
54829--54911
27
3.1
26
72
8
85
57
4
0
37
1.20
54847--54889
19
2.3
19
88
8
61
62
2
0
34
1.08

Tables:   1

The End!