Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005806.1 Kokia drynarioides strain JFW-HI SEQ_120088, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61049

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5891--5939
20
2.5
20
100
0
98
44
42
4
8
1.53
5891--5945
20
2.8
20
94
2
85
47
40
3
9
1.53
6056--6101
20
2.4
19
80
16
51
8
4
34
52
1.52
6984--7054
34
2.1
34
91
0
115
40
5
14
39
1.69
7101--7155
26
2.1
26
82
0
65
34
14
25
25
1.94
9350--9408
26
2.2
27
82
11
68
22
8
10
59
1.56
13198--13249
27
2.0
26
85
11
70
19
1
11
67
1.31
16397--16426
2
15.0
2
100
0
60
50
0
0
50
1.00
20370--20395
12
2.2
12
100
0
52
92
0
7
0
0.39
20941--20986
24
1.9
24
90
0
74
8
2
10
78
1.05
20941--20989
21
2.2
24
82
17
61
8
2
12
77
1.07
26089--26164
31
2.5
30
81
12
84
46
13
3
36
1.61
40654--40899
125
2.0
125
85
3
334
23
15
21
39
1.92
45746--45784
17
2.3
18
87
12
57
33
0
0
66
0.92
48402--48454
24
2.2
25
86
3
72
60
1
1
35
1.19
48400--48457
30
1.9
30
82
6
73
58
1
1
37
1.18
48828--48872
22
2.0
23
86
4
65
40
0
2
57
1.11
51879--52141
88
3.0
88
96
0
490
23
15
22
38
1.93
53257--53282
12
2.2
12
100
0
52
50
7
19
23
1.73
53631--53679
20
2.5
20
83
6
64
53
12
16
18
1.73
54140--54194
27
2.2
25
78
18
60
61
0
1
36
1.06
54626--54659
17
2.0
17
94
0
59
44
0
2
52
1.16
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55157--55203
23
1.9
25
83
12
62
53
0
2
44
1.12
55171--55226
16
3.5
16
77
15
62
57
0
0
42
0.99
55140--55237
33
2.9
32
76
11
99
53
0
3
43
1.16
60795--60824
10
3.1
10
95
4
53
80
0
0
20
0.72

Tables:   1

The End!