Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01005814.1 Kokia drynarioides strain JFW-HI SEQ_120096, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 929

Length: 1549
ACGTcount: A:0.34, C:0.17, G:0.20, T:0.29


Found at i:682 original size:13 final size:13

Alignment explanation


    Indices: 664--690  Score: 54
    Period size: 13  Copynumber: 2.1  Consensus size: 13

        654 AAATATGATG

                         
        664 ATCGGCCTTACCT
          1 ATCGGCCTTACCT

                         
        677 ATCGGCCTTACCT
          1 ATCGGCCTTACCT

             
        690 A
          1 A

        691 CTTAAGGTTA


Statistics
Matches: 14,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  13   14  1.00

ACGTcount: A:0.19, C:0.37, G:0.15, T:0.30


Consensus pattern (13 bp):   
ATCGGCCTTACCT
Done.