Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005925.1 Kokia drynarioides strain JFW-HI SEQ_120301, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  120179

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14665--14708
22
2.0
23
86
4
63
31
15
9
43
1.79
24005--24050
24
1.9
23
86
8
65
56
6
4
32
1.45
25089--25125
11
3.5
11
78
14
51
10
13
0
75
1.04
25089--25132
21
2.1
21
95
4
81
9
13
0
77
0.99
26069--26120
6
9.2
6
82
17
67
69
0
1
28
0.99
31327--31379
23
2.3
23
77
3
63
26
24
22
26
2.00
39611--39668
23
2.5
23
94
0
98
22
24
25
27
2.00
41329--41415
32
2.7
32
80
3
104
35
9
9
45
1.68
64841--64873
9
3.7
9
95
0
57
24
0
9
66
1.20
65382--65447
32
2.1
32
100
0
132
33
24
9
33
1.87
73761--73845
36
2.4
36
93
0
152
34
34
11
20
1.89
85607--85657
21
2.4
21
100
0
102
41
19
15
23
1.90
95140--95175
16
2.2
16
95
0
63
22
5
13
58
1.56
97809--98018
106
2.0
108
91
3
345
40
7
10
41
1.67
97955--98434
123
3.9
123
91
2
757
42
6
10
40
1.65
97955--98443
245
2.0
249
90
3
783
43
6
10
39
1.65
100718--100775
26
2.2
26
79
14
66
32
3
1
62
1.22
101338--101465
63
2.0
63
95
0
229
25
18
15
40
1.90
101592--102709
78
14.2
78
84
3
1303
31
23
18
26
1.97
104413--104442
9
3.3
9
95
0
51
10
0
3
86
0.67

Tables:   1

The End!