Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01000596.1 Kokia drynarioides strain JFW-HI SEQ_111531, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 6165
ACGTcount: A:0.30, C:0.19, G:0.19, T:0.32


Found at i:3196 original size:14 final size:14

Alignment explanation


    Indices: 3177--3204  Score: 56
    Period size: 14  Copynumber: 2.0  Consensus size: 14

       3167 ATACTTGTCT

                          
       3177 ACACTTTGCGTTAC
          1 ACACTTTGCGTTAC

                          
       3191 ACACTTTGCGTTAC
          1 ACACTTTGCGTTAC

       3205 GTTGTATTTT


Statistics
Matches: 14,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  14   14  1.00

ACGTcount: A:0.21, C:0.29, G:0.14, T:0.36


Consensus pattern (14 bp):   
ACACTTTGCGTTAC
Done.