Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01000599.1 Kokia drynarioides strain JFW-HI SEQ_111537, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50464

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
583--873
29
9.8
29
78
3
285
35
28
3
32
1.73
583--875
59
4.9
59
89
2
417
35
28
3
32
1.73
2512--2576
31
2.1
31
85
5
87
47
4
7
40
1.53
6581--6612
3
10.7
3
100
0
64
65
0
0
34
0.93
9253--9301
25
2.0
25
84
8
64
34
2
0
63
1.06
9258--9295
18
2.2
18
90
4
60
31
2
0
65
1.06
19392--19730
177
1.9
176
87
4
493
32
11
17
38
1.86
28014--28043
14
2.2
13
94
5
51
70
3
0
26
1.03
28403--28437
18
1.9
18
88
0
52
65
2
2
28
1.21
37785--37825
19
2.2
20
86
8
59
41
4
0
53
1.22
37950--37989
15
2.5
16
88
8
55
35
2
2
60
1.24
37967--38047
27
3.0
27
81
5
74
46
0
0
53
1.00
37967--38047
28
2.9
28
81
5
76
46
0
0
53
1.00
43825--43897
37
1.9
39
89
10
116
28
8
13
49
1.71
45739--45835
50
1.9
49
89
6
142
21
20
24
31
1.97
47153--47189
7
5.3
7
90
9
58
0
59
0
40
0.97
47142--47189
14
3.6
13
86
10
62
2
58
0
39
1.10
49275--49332
22
2.6
23
80
2
64
12
20
27
39
1.88
50361--50427
33
2.0
33
100
0
134
37
17
14
29
1.91

Tables:   1

The End!