Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01005998.1 Kokia drynarioides strain JFW-HI SEQ_120424, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40856

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
333--465
58
2.3
59
92
3
216
34
0
10
54
1.40
1749--1795
6
7.8
6
97
0
76
61
0
21
17
1.34
7582--7615
17
1.9
18
88
5
52
50
0
0
50
1.00
8592--8690
17
5.7
17
77
15
87
44
8
1
46
1.39
8645--8690
17
2.7
17
100
0
92
47
8
0
43
1.34
9856--9894
18
2.2
18
90
0
60
41
2
2
53
1.28
11476--11546
28
2.6
28
88
2
99
32
7
29
30
1.84
11561--11784
60
3.8
59
83
8
260
40
2
23
33
1.67
11522--11791
119
2.3
117
79
8
296
38
3
25
32
1.72
11622--11724
28
3.5
28
70
19
84
39
1
22
35
1.65
11531--11784
29
8.5
29
66
14
108
39
2
24
33
1.68
12881--12923
22
2.0
22
90
0
68
37
0
2
60
1.10
12959--12986
3
9.3
3
100
0
56
35
0
0
64
0.94
13662--13732
6
12.2
6
73
11
67
54
1
0
43
1.08
13662--13760
17
5.4
18
76
16
80
55
3
0
41
1.15
13664--13749
41
2.1
40
89
2
127
54
3
0
41
1.17
14202--14457
132
1.9
132
83
3
327
32
23
19
24
1.97
16286--16344
24
2.5
24
86
2
75
40
20
13
25
1.89
27408--27432
2
12.5
2
100
0
50
48
0
0
52
1.00
29862--29907
24
1.9
23
86
8
65
56
6
4
32
1.45
36635--36693
30
2.0
30
83
6
75
16
38
20
23
1.92

Tables:   1

The End!