Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01006003.1 Kokia drynarioides strain JFW-HI SEQ_120434, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  222010

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13579--13629
26
1.9
27
84
11
70
64
3
11
19
1.41
13703--13754
15
3.2
16
78
8
52
61
7
0
30
1.24
17426--17480
25
2.2
26
86
3
76
69
5
9
16
1.34
43350--43385
18
2.0
18
88
0
54
16
44
0
38
1.48
44511--44554
21
2.1
21
86
0
61
34
25
6
34
1.82
44518--44559
21
2.0
21
90
0
66
28
23
9
38
1.86
46119--46157
12
3.2
12
96
3
69
28
7
0
64
1.21
50606--50717
53
2.1
55
81
3
129
34
20
17
26
1.95
65417--65457
22
1.9
22
85
5
57
19
17
9
53
1.70
67349--67426
33
2.4
33
95
0
138
24
12
14
48
1.78
69829--69866
16
2.5
15
87
12
51
23
2
2
71
1.12
73648--73687
21
1.9
21
85
10
55
10
37
0
52
1.35
85669--85710
22
1.9
22
85
0
57
21
23
26
28
1.99
90649--90701
12
4.2
12
75
13
52
1
35
0
62
1.06
96649--96688
15
2.7
15
96
0
71
25
40
0
35
1.56
110954--110984
11
2.7
12
90
10
55
29
0
0
70
0.87
114968--115003
18
2.0
18
88
0
54
16
44
0
38
1.48
116126--116173
21
2.3
21
85
7
62
29
29
6
35
1.82
116136--116179
21
2.1
21
91
0
70
29
25
9
36
1.86
133069--133110
15
2.7
15
85
3
57
64
0
35
0
0.94
142588--142651
30
2.2
30
97
2
121
21
10
9
57
1.61
151570--151614
22
2.2
20
88
8
63
77
0
20
2
0.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
151580--151622
12
3.7
12
81
15
54
76
0
20
2
0.89
160790--160881
47
2.0
47
97
0
175
34
25
17
22
1.96
164311--164338
7
4.0
7
100
0
56
14
0
42
42
1.45
169542--169583
22
1.9
22
90
0
66
54
14
11
19
1.70
172081--172114
17
2.0
17
88
0
50
38
5
14
41
1.70
172691--172739
21
2.3
21
89
6
73
12
40
24
22
1.88
176667--176713
18
2.6
18
80
13
51
6
25
0
68
1.13
204651--204717
30
2.2
31
84
7
93
40
5
14
38
1.71
204666--204729
30
2.1
30
100
0
128
42
10
12
34
1.78
205054--205099
23
2.0
23
100
0
92
34
17
4
43
1.69
213813--214035
49
4.6
48
84
2
212
21
30
16
30
1.95
215572--215621
21
2.3
22
82
6
57
36
8
2
54
1.42
215572--215629
22
2.7
22
78
7
57
37
6
1
53
1.38
217852--217953
37
2.8
37
87
0
141
40
33
16
9
1.82

Tables:   1

The End!