Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01006024.1 Kokia drynarioides strain JFW-HI SEQ_120469, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  99399

Tables:   1   

This is table  1  of  1  ( 53 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6822--6930
56
1.9
56
85
7
150
20
23
30
25
1.98
7497--7553
20
2.6
22
78
8
64
15
1
50
31
1.54
7504--7557
24
2.2
25
80
9
67
16
1
51
29
1.55
8733--8779
16
2.8
17
78
12
53
25
2
0
72
0.96
9050--9093
19
2.3
19
84
0
52
34
0
2
63
1.07
20210--20265
23
2.5
23
69
13
62
46
3
12
37
1.59
20895--21215
26
12.3
26
78
7
251
32
16
25
24
1.96
20899--21205
52
5.9
52
80
6
277
32
17
26
24
1.97
28288--28486
78
2.6
76
80
6
193
31
16
25
26
1.96
28288--28480
26
7.4
26
78
6
167
32
15
25
26
1.96
28288--28483
52
3.8
52
81
4
200
32
15
26
26
1.96
29338--29389
24
2.1
25
85
7
70
40
7
3
48
1.50
30127--30173
17
2.8
17
75
12
51
59
0
4
36
1.17
43911--43938
3
9.3
3
100
0
56
0
35
0
64
0.94
48427--48461
16
2.2
16
89
0
52
54
5
5
34
1.48
51081--51149
35
2.0
33
88
5
102
62
4
13
20
1.47
51113--51165
27
2.0
27
96
0
97
62
3
13
20
1.46
51248--51317
29
2.4
29
92
0
122
48
10
2
38
1.51
53172--53347
55
3.2
55
81
9
214
26
9
15
48
1.74
57550--57636
28
3.1
27
75
15
79
63
2
2
32
1.19
57567--57636
19
3.8
18
76
16
63
64
1
1
32
1.11
57578--57628
8
5.7
9
75
15
52
70
1
1
25
1.08
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
57579--57628
18
2.9
16
85
14
64
70
2
2
26
1.09
57920--58003
34
2.4
34
79
14
84
33
2
0
64
1.07
58978--59026
19
2.5
20
75
15
57
30
2
2
65
1.15
59009--59067
28
2.1
28
85
14
79
33
0
1
64
1.04
59007--59068
18
3.3
18
74
19
56
33
0
1
64
1.03
59926--59961
19
1.9
18
88
5
54
38
2
0
58
1.13
60052--60114
20
3.3
19
71
13
58
41
7
6
44
1.59
60047--60128
37
2.2
37
95
0
146
42
6
6
45
1.53
60073--60132
18
3.3
18
68
13
59
43
3
6
46
1.46
64653--64699
10
4.5
10
80
17
51
85
2
2
10
0.78
64664--64688
13
1.9
13
100
0
50
88
0
0
12
0.53
64653--64700
8
6.0
8
81
16
55
83
2
2
12
0.83
72152--72796
317
2.0
318
90
0
1013
36
17
17
28
1.92
77992--78070
31
2.6
30
92
4
124
41
11
17
29
1.84
77995--78121
31
4.3
30
75
11
100
46
10
14
28
1.78
78825--78869
22
2.0
22
100
0
90
15
13
8
62
1.54
79554--79588
18
1.9
18
94
0
61
25
0
5
68
1.11
79605--79638
17
2.0
17
88
0
50
29
0
2
67
1.05
79614--79652
17
2.2
18
86
9
53
25
2
5
66
1.25
81809--81865
2
28.5
2
92
0
96
49
0
3
47
1.18
82984--83020
20
1.9
20
88
5
58
54
8
5
32
1.53
85099--85130
16
2.0
16
100
0
64
31
43
0
25
1.55
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
92407--92525
51
2.3
51
86
0
166
36
24
8
31
1.85
92589--92743
33
4.7
32
78
6
130
23
44
1
30
1.61
92611--92739
66
2.0
66
81
9
156
24
42
1
31
1.64
93175--93219
23
2.0
23
86
4
65
55
24
2
17
1.53
93621--93725
32
3.3
32
86
2
140
29
2
22
44
1.67
93752--93795
17
2.6
17
88
0
70
25
2
22
50
1.61
94455--94524
35
2.0
36
82
2
88
67
15
8
8
1.41
98184--98741
23
24.3
23
88
0
830
34
5
13
46
1.66
98811--98924
36
3.2
36
86
5
158
26
12
26
35
1.92

Tables:   1

The End!