Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01006045.1 Kokia drynarioides strain JFW-HI SEQ_120511, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  154353

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13239--13515
108
2.6
107
87
0
401
36
24
18
21
1.95
14772--14822
25
2.0
25
100
0
102
45
11
11
31
1.77
20594--20634
13
3.2
13
86
3
57
34
0
19
46
1.50
21304--21352
2
24.5
2
100
0
98
51
0
0
48
1.00
38058--38354
52
5.7
52
91
0
432
24
13
25
35
1.92
38057--38354
156
1.9
156
91
0
488
25
13
25
35
1.92
48249--48396
35
4.2
36
78
2
149
34
10
26
28
1.90
73540--73583
21
2.0
22
86
4
63
52
4
34
9
1.54
81819--81875
10
5.9
10
74
15
57
5
17
0
77
0.95
88245--88299
28
2.0
28
88
0
83
29
18
12
40
1.87
108394--108569
36
4.9
35
88
3
235
38
12
23
25
1.90
108405--108569
71
2.3
71
87
6
235
38
12
23
25
1.90
109932--109975
21
2.1
21
91
0
70
38
15
6
38
1.75
115988--116021
17
2.0
17
88
0
50
38
2
23
35
1.70
117465--117508
21
2.1
21
82
0
52
36
9
20
34
1.84
117954--118039
29
3.0
27
75
10
82
32
8
20
38
1.82
123140--123378
52
4.6
52
80
6
261
33
23
15
27
1.95
137268--137336
34
2.0
34
100
0
138
17
14
5
62
1.51
142023--142220
78
2.6
76
85
4
269
34
12
9
43
1.74
150359--150410
26
2.0
26
84
0
68
57
7
5
28
1.50

Tables:   1

The End!