Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01006052.1 Kokia drynarioides strain JFW-HI SEQ_120522, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55557

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4863--4908
23
2.0
23
84
16
60
50
8
13
28
1.70
15105--15139
9
3.9
9
85
14
54
80
0
20
0
0.72
15882--15909
6
4.7
6
100
0
56
35
14
17
32
1.90
26327--26409
22
3.8
22
81
12
98
25
16
25
32
1.96
26427--26491
34
1.9
33
87
9
96
27
10
30
30
1.91
26501--26557
29
2.0
29
89
0
87
33
29
22
14
1.93
28398--28432
17
2.2
15
90
10
52
37
2
8
51
1.47
31259--31445
37
5.1
37
83
5
216
34
29
21
14
1.93
31259--31445
74
2.5
74
84
5
243
34
29
21
14
1.93
33976--34031
28
2.0
29
83
16
73
7
16
3
73
1.20
34598--34622
10
2.5
10
100
0
50
92
0
0
8
0.40
39122--39155
11
3.0
11
83
8
50
76
0
5
17
0.98
39703--39798
46
2.1
46
100
0
192
54
6
14
25
1.63
45581--45621
12
3.4
12
93
0
64
7
21
43
26
1.79
46311--46423
37
3.1
37
82
0
136
31
32
21
14
1.93
48729--49000
23
11.8
23
89
1
384
48
13
4
33
1.62
49081--49207
66
1.9
66
85
3
175
44
25
11
18
1.82
49467--49653
36
5.2
36
83
0
212
34
21
9
34
1.86
52296--52343
23
2.1
23
96
0
87
47
12
4
35
1.60
52397--52510
23
5.0
23
91
0
183
45
14
4
35
1.64
52249--52443
101
1.9
101
98
0
381
36
16
7
38
1.77
52587--52723
66
2.1
66
87
0
193
37
29
13
18
1.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
52985--53198
36
5.9
36
82
5
261
36
21
9
31
1.86
52985--53198
110
2.0
110
84
3
281
36
21
9
31
1.86
52982--53204
72
3.1
71
83
5
302
36
22
9
31
1.86

Tables:   1

The End!