Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01006103.1 Kokia drynarioides strain JFW-HI SEQ_120608, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17211

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35--65
10
2.9
11
90
9
55
61
0
9
29
1.28
668--721
23
2.3
23
90
0
81
11
25
20
42
1.85
688--789
23
4.5
22
77
8
89
11
21
26
40
1.88
688--789
45
2.2
46
76
8
102
11
21
26
40
1.88
1581--1622
19
2.2
20
82
4
50
52
2
2
42
1.27
3948--3986
18
2.1
18
85
4
51
69
2
0
28
1.02
4059--4093
18
1.9
19
88
11
56
25
31
17
25
1.97
4178--4250
18
3.9
18
83
5
83
35
1
2
60
1.20
4199--4259
9
6.8
9
76
0
59
36
1
1
60
1.16
4208--4264
27
2.1
27
90
0
87
33
1
1
63
1.15
7719--7756
17
2.2
17
86
9
51
55
0
2
42
1.14
7994--8031
20
1.9
20
89
10
60
31
0
13
55
1.38
8857--8886
2
15.0
2
100
0
60
50
0
0
50
1.00
14409--14455
16
3.1
16
77
22
64
38
6
0
55
1.26
14409--14455
15
3.1
16
75
12
53
38
6
0
55
1.26
14409--14468
30
2.0
30
83
6
77
36
10
3
50
1.53

Tables:   1

The End!