Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01006111.1 Kokia drynarioides strain JFW-HI SEQ_120621, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46617

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1254--1455
30
6.7
30
81
5
210
38
2
25
33
1.71
1255--1478
61
3.7
61
81
5
231
37
3
26
32
1.74
4002--4039
14
2.8
14
88
4
51
18
18
5
57
1.58
5161--5451
52
5.6
52
89
0
431
36
24
14
25
1.93
7050--7078
15
1.9
15
100
0
58
48
10
13
27
1.75
21168--21211
16
2.7
16
89
10
63
81
0
18
0
0.68
21168--21212
22
2.0
23
91
8
74
80
0
20
0
0.72
22277--23290
49
20.7
49
74
2
428
40
17
22
18
1.91
22375--23184
147
5.5
147
75
3
621
39
17
23
19
1.92
22187--23290
98
11.3
97
76
4
547
40
17
22
18
1.91
23003--23233
97
2.4
97
80
10
247
38
18
24
18
1.92
22933--23220
146
2.0
147
80
3
330
39
18
23
19
1.92
24595--24640
22
2.0
25
83
12
62
28
0
8
63
1.24
29181--29246
22
3.0
22
75
14
64
18
22
15
43
1.87
37526--37565
21
2.0
20
90
5
62
72
5
12
10
1.26
43035--43061
3
9.0
3
100
0
54
0
0
33
66
0.92

Tables:   1

The End!