Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01006175.1 Kokia drynarioides strain JFW-HI SEQ_120740, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  102808

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1401--1453
15
3.3
15
76
19
54
33
0
0
66
0.92
1395--1453
18
3.4
18
74
21
56
32
0
0
67
0.91
1411--1456
18
2.6
18
82
6
58
34
0
0
65
0.93
3085--3460
132
3.0
119
86
12
533
32
8
0
58
1.33
3249--3274
8
3.2
8
100
0
52
23
11
0
65
1.25
3298--3480
56
3.1
57
77
10
192
31
9
0
58
1.34
3296--3478
62
3.1
59
80
13
230
31
9
0
58
1.34
6194--6245
15
3.3
15
80
15
61
34
0
0
65
0.93
14717--14931
41
5.1
41
82
6
225
26
19
20
34
1.96
14725--14931
87
2.5
82
79
8
209
26
19
19
35
1.95
14717--14971
128
2.0
126
81
8
291
27
18
19
34
1.95
15946--15993
10
4.9
10
84
5
53
47
2
4
45
1.33
15958--16011
11
5.0
11
74
19
51
48
1
1
48
1.23
26140--26170
3
10.3
3
92
0
53
29
32
3
35
1.73
29346--29408
24
2.6
24
84
0
81
25
12
9
52
1.69
30152--30194
22
2.0
22
100
0
86
23
2
13
60
1.45
30247--30317
21
3.3
21
70
5
61
38
4
8
49
1.53
43662--43764
29
3.6
29
84
5
111
41
19
15
23
1.89
43674--43730
17
3.6
17
69
26
54
40
21
14
24
1.90
43720--43798
35
2.3
35
86
0
104
39
13
21
25
1.90
43691--43814
29
4.1
29
75
13
106
41
16
18
24
1.90
44354--44443
40
2.2
40
82
2
108
35
35
10
18
1.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44723--44772
20
2.5
20
81
15
50
44
2
14
40
1.56
45853--45955
36
2.9
36
92
1
172
35
14
26
23
1.93
46638--46695
21
2.8
21
86
0
71
27
17
22
32
1.96
56850--56948
36
2.8
36
84
1
128
38
11
25
25
1.89
64538--64575
18
2.1
19
90
5
60
71
0
26
2
1.00
65019--65065
19
2.5
19
96
0
85
14
12
10
61
1.56
65076--65105
11
2.7
11
94
0
51
26
13
0
60
1.34
65657--65686
15
1.9
15
93
6
51
80
0
20
0
0.72
81749--81778
11
2.7
11
94
0
51
80
0
0
20
0.72
82559--82588
14
2.1
14
93
0
51
70
3
6
20
1.25
82604--82639
13
2.8
13
87
4
56
50
16
0
33
1.46
85065--85139
21
3.6
21
75
10
57
29
26
16
28
1.96
86953--86994
21
2.0
22
85
4
59
30
19
4
45
1.71
98464--98512
24
2.0
24
100
0
98
57
18
4
20
1.57

Tables:   1

The End!