Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01006177.1 Kokia drynarioides strain JFW-HI SEQ_120742, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72873

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
194--253
27
2.2
27
82
8
68
28
11
28
31
1.92
372--796
117
3.6
116
81
7
475
36
3
23
36
1.71
373--797
58
7.3
58
83
6
448
36
3
23
36
1.71
1670--1720
7
7.0
7
75
16
50
43
0
0
56
0.99
1736--1787
21
2.5
19
77
17
50
40
5
0
53
1.25
2486--2579
6
16.7
6
67
16
58
51
4
1
43
1.28
2486--2579
17
5.6
16
76
7
89
51
4
1
43
1.28
2613--3408
94
8.7
94
86
7
1187
42
6
3
47
1.46
2612--2766
47
3.2
48
64
18
124
43
6
2
47
1.42
2927--3074
48
3.1
48
68
21
139
40
6
4
49
1.46
3198--3345
48
3.1
48
66
21
121
40
6
4
49
1.46
2613--3366
271
2.8
268
95
1
1332
42
6
3
47
1.46
3506--3561
22
2.5
22
91
0
94
35
35
8
19
1.83
3506--3576
22
3.2
22
82
4
81
35
36
7
21
1.80
5227--5294
12
5.7
12
70
11
50
30
36
23
8
1.85
5224--5293
36
1.9
36
85
5
97
30
35
24
10
1.88
5746--5927
30
6.1
30
88
2
240
29
5
3
61
1.36
5762--5804
18
2.4
18
76
3
52
34
2
2
60
1.22
6795--6867
37
2.0
37
83
5
94
34
2
20
42
1.67
6842--7291
61
7.4
61
78
8
447
41
12
16
30
1.85
6842--7270
121
3.5
120
83
4
524
41
12
16
30
1.85
7258--7430
55
3.3
53
77
11
153
34
12
14
38
1.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18276--18302
3
9.0
3
100
0
54
33
0
66
0
0.92
34341--34379
20
2.0
20
84
0
51
46
20
7
25
1.77
35756--35782
13
2.1
13
100
0
54
0
7
0
92
0.38
50165--50190
1
26.0
1
100
0
52
100
0
0
0
0.00
60720--60751
2
16.0
2
100
0
64
50
0
0
50
1.00
62075--62744
337
2.0
335
97
0
1268
32
28
12
26
1.93
71708--71748
20
2.0
20
90
9
66
65
12
21
0
1.25

Tables:   1

The End!