Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01006199.1 Kokia drynarioides strain JFW-HI SEQ_120769, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53735

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9187--9236
24
2.1
24
100
0
100
20
34
20
26
1.96
9627--9804
9
19.0
9
70
15
69
57
2
3
35
1.30
9672--9712
20
2.0
21
86
13
59
56
0
0
43
0.99
9589--9719
55
2.4
56
79
11
137
61
1
0
36
1.11
9728--9785
19
3.1
18
75
20
57
63
3
1
31
1.21
9568--9805
37
6.4
35
69
20
137
60
2
3
34
1.25
10223--10267
21
2.1
22
88
12
67
35
0
8
55
1.31
18321--18363
18
2.5
16
78
14
50
30
11
11
46
1.76
18724--18777
24
2.2
24
96
0
99
44
11
12
31
1.78
18734--18777
14
3.4
14
70
23
51
43
11
13
31
1.80
21434--21462
2
14.5
2
100
0
58
51
0
0
48
1.00
30102--30148
22
2.1
23
84
4
60
40
2
2
55
1.24
32526--32562
17
2.2
17
90
0
56
16
2
0
81
0.81
37057--37099
3
14.3
3
100
0
86
67
0
0
32
0.91
37577--37601
5
5.0
5
100
0
50
60
0
0
40
0.97
39237--39304
27
2.7
25
75
8
68
60
2
2
33
1.27
41409--41488
17
4.4
18
75
12
74
38
5
6
50
1.50
41441--41497
17
3.2
17
78
12
53
45
0
5
49
1.24
41608--41642
14
2.5
14
95
0
61
45
37
5
11
1.64
42278--42347
24
2.9
24
73
12
63
55
0
2
41
1.14
42290--42332
16
2.6
17
78
14
54
53
0
2
44
1.13
42322--42346
13
1.9
13
100
0
50
64
0
0
36
0.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43397--43560
29
5.7
29
84
2
195
39
24
1
34
1.66
43397--43608
58
3.6
59
82
4
171
40
24
2
32
1.70
43429--43725
58
5.0
58
74
11
171
36
24
4
35
1.74
45517--45591
23
3.4
23
75
15
86
4
5
20
70
1.23
45528--45612
43
2.0
43
86
4
118
5
4
16
72
1.21
45542--45640
12
8.8
12
69
11
57
7
6
17
69
1.31
45553--45695
67
2.1
67
83
5
173
8
5
17
68
1.35
45540--45642
23
4.6
23
74
8
79
6
5
17
69
1.30
45582--45699
43
2.7
43
75
10
121
8
5
19
66
1.40
49810--49844
18
2.0
18
94
5
63
48
0
0
51
1.00
52030--52063
15
2.2
16
89
5
52
32
0
0
67
0.91
52696--52737
19
2.3
19
91
4
68
38
0
0
61
0.96
53704--53735
2
16.0
2
100
0
64
50
0
0
50
1.00

Tables:   1

The End!