Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01006218.1 Kokia drynarioides strain JFW-HI SEQ_120789, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  83349

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1927--1959
2
16.5
2
100
0
66
48
0
0
51
1.00
2084--2109
2
13.0
2
100
0
52
50
50
0
0
1.00
3494--3525
2
16.0
2
93
0
55
46
3
0
50
1.17
3819--3891
31
2.4
30
79
4
83
35
12
13
38
1.83
9897--10044
73
2.0
73
97
0
278
36
13
10
39
1.80
11154--11213
30
2.0
31
84
12
81
55
6
0
38
1.27
11475--11511
18
2.1
18
90
5
58
45
5
0
48
1.25
17790--17831
2
21.0
2
100
0
84
50
0
0
50
1.00
26003--26051
24
2.0
24
81
14
57
38
10
8
42
1.68
37465--37538
29
2.5
30
88
2
114
43
13
8
35
1.74
45619--45664
2
23.0
2
90
0
74
0
45
0
54
0.99
49760--49802
18
2.4
18
80
7
52
51
0
2
46
1.13
59753--59809
22
2.6
22
100
0
114
38
0
5
56
1.22
60628--60776
77
1.9
77
98
0
289
49
8
15
26
1.73
63540--63597
29
2.0
30
86
3
82
34
17
10
37
1.84
63775--63838
29
2.2
30
80
5
76
34
9
17
39
1.82
63784--63859
29
2.6
29
82
4
89
38
13
18
30
1.89
75866--75895
3
10.0
3
100
0
60
33
0
0
66
0.92

Tables:   1

The End!