Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01006225.1 Kokia drynarioides strain JFW-HI SEQ_120796, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  106016

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2061--2126
28
2.4
27
78
19
73
45
1
7
45
1.41
2720--2774
19
2.9
18
74
12
56
40
3
5
50
1.43
23446--23515
36
1.9
37
82
8
90
54
1
0
44
1.09
36436--36479
2
22.0
2
100
0
88
50
0
0
50
1.00
36940--37237
150
2.0
150
91
1
490
29
16
18
35
1.93
37765--37811
21
2.2
21
84
0
67
27
4
12
55
1.56
57120--57183
10
6.4
10
71
12
51
32
6
1
59
1.32
70787--70820
18
2.0
17
88
11
52
47
0
8
44
1.34
70957--71029
20
3.7
19
71
12
58
31
0
4
64
1.12
73404--73447
14
3.0
15
83
12
56
63
0
0
36
0.95
83427--83464
20
1.9
20
88
0
58
36
2
0
60
1.11
83844--83876
18
1.9
17
88
11
50
45
0
0
54
0.99
90364--90405
5
8.4
5
97
0
75
57
0
40
2
1.12
95481--95509
4
7.2
4
100
0
58
75
0
0
24
0.80
95919--95963
17
2.6
17
76
13
56
28
8
22
40
1.84
102324--102374
23
2.2
23
86
6
68
39
1
5
52
1.37
102371--102423
24
2.1
26
82
6
65
47
0
3
49
1.19
103829--103862
16
2.1
16
83
0
50
58
14
0
26
1.36

Tables:   1

The End!