Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01006274.1 Kokia drynarioides strain JFW-HI SEQ_120845, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  164310

Tables:   1   

This is table  1  of  1  ( 57 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
990--1083
44
2.1
44
84
7
118
31
4
25
38
1.75
1304--1354
24
2.1
24
82
10
59
60
0
1
37
1.08
3221--3249
2
14.5
2
100
0
58
51
0
0
48
1.00
15287--15350
32
2.0
32
96
0
119
32
21
23
21
1.98
21171--21324
79
1.9
83
81
6
190
46
12
11
30
1.76
21847--21873
13
2.1
13
100
0
54
48
22
0
29
1.51
24366--24409
21
2.0
23
82
8
56
38
4
6
50
1.50
26188--26226
19
2.0
20
90
5
62
35
10
5
48
1.59
27601--27649
24
2.0
24
84
0
62
53
8
18
20
1.70
28809--28902
12
7.9
12
70
10
68
67
23
4
5
1.30
28809--28938
22
5.6
23
76
9
84
66
22
3
7
1.34
32416--32527
52
2.2
51
85
1
143
36
15
7
41
1.74
32428--32516
26
3.5
25
83
6
115
37
13
8
40
1.76
32428--32528
26
4.0
25
82
5
112
36
15
7
39
1.77
32612--32692
26
3.2
26
91
1
119
40
16
9
33
1.81
32451--32789
182
1.9
182
89
0
534
37
15
8
37
1.79
49172--49210
20
2.0
20
85
10
53
28
28
15
28
1.96
51448--51482
18
1.9
19
88
11
56
17
17
22
42
1.88
57935--57982
17
2.8
18
84
9
64
25
20
6
47
1.73
58590--58619
2
15.5
2
93
6
53
53
0
0
46
1.00
65960--65990
14
2.2
14
100
0
62
0
12
0
87
0.55
67058--67101
21
2.0
21
86
4
61
0
34
0
65
0.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
76538--76611
31
2.4
32
86
6
107
54
12
6
27
1.62
76560--76637
31
2.6
31
85
4
97
53
12
8
24
1.67
77212--77252
20
2.0
20
90
9
66
43
7
0
48
1.30
77988--78040
13
4.0
13
73
4
52
37
1
5
54
1.35
85379--85412
16
2.1
17
88
5
52
58
26
5
8
1.51
102100--102170
34
2.1
34
97
0
133
39
15
8
36
1.78
103751--103781
15
2.1
15
100
0
62
35
12
19
32
1.90
105310--105505
97
2.0
98
95
1
358
36
18
7
37
1.79
106599--106654
3
18.7
3
89
7
87
0
33
0
66
0.92
111243--111376
40
3.3
40
92
0
214
40
9
27
22
1.85
112052--112096
21
2.1
21
83
0
54
35
13
20
31
1.91
118728--118777
15
3.3
15
84
13
59
78
0
20
2
0.86
131752--131795
18
2.5
18
88
3
63
15
11
13
59
1.62
132373--132415
17
2.5
18
88
7
63
79
2
18
0
0.85
132373--132429
18
3.4
17
84
13
73
80
3
15
0
0.84
136858--137031
40
4.3
40
87
0
267
40
9
23
27
1.85
140913--140956
22
2.0
22
100
0
88
18
13
18
50
1.79
141873--141920
25
1.9
25
91
0
78
47
14
20
16
1.82
142689--142809
56
2.2
56
98
0
233
28
13
25
32
1.93
143834--143866
14
2.2
16
89
10
52
27
3
3
66
1.21
147804--147876
23
3.0
23
75
14
76
23
4
4
68
1.24
147968--148028
26
2.4
25
77
17
63
19
0
4
75
0.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
147970--148019
16
3.1
16
80
16
50
22
0
4
74
0.99
147976--148044
35
2.0
34
81
13
79
21
1
5
71
1.16
151820--151858
16
2.8
13
79
20
51
28
20
10
41
1.85
153984--154018
15
2.3
15
85
0
52
85
2
11
0
0.69
154892--155518
102
6.2
102
83
2
697
35
18
19
25
1.95
155046--155485
50
8.7
49
68
11
215
35
19
20
25
1.96
154929--155517
306
1.9
306
83
2
770
35
19
19
25
1.95
156131--156182
13
3.8
13
78
17
52
55
32
1
9
1.43
156132--156189
29
2.1
26
87
9
80
56
27
1
13
1.47
159283--159343
26
2.4
25
77
17
63
19
0
4
75
0.98
159285--159334
16
3.1
16
80
16
50
22
0
4
74
0.99
161095--161172
37
2.2
35
79
9
86
48
3
0
47
1.20
161953--161978
7
3.7
7
100
0
52
42
11
15
30
1.82

Tables:   1

The End!