Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01006339.1 Kokia drynarioides strain JFW-HI SEQ_120914, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27035

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3307--3342
15
2.3
16
90
4
56
72
0
0
27
0.85
10704--10740
18
2.0
19
89
5
58
81
0
16
2
0.81
10704--10738
9
3.9
9
88
0
52
82
0
14
2
0.77
11607--11649
9
4.4
10
82
11
54
86
0
13
0
0.58
11616--11651
7
5.4
7
87
12
58
86
0
13
0
0.58
11606--11654
19
2.6
19
83
3
73
81
0
18
0
0.69
11605--11648
12
3.7
12
84
6
54
86
0
13
0
0.57
12296--12337
20
2.1
20
100
0
84
42
9
14
33
1.78
12626--12950
49
6.6
48
75
6
213
35
18
30
16
1.92
12797--12964
50
3.4
50
76
3
151
35
17
27
18
1.94
12624--12950
99
3.3
97
73
13
272
35
18
29
16
1.93
13184--13446
43
6.0
43
83
6
300
32
19
18
29
1.95
13168--13441
84
3.1
85
81
8
311
33
18
18
29
1.95
13478--13801
122
2.7
121
79
5
321
38
16
21
23
1.93
13729--13895
84
2.0
84
84
2
219
34
17
23
23
1.96
13871--14160
153
1.9
152
88
0
436
42
16
19
21
1.89
14023--14291
123
2.2
123
87
2
398
40
17
20
21
1.92
14089--14499
206
2.0
208
87
2
605
38
16
20
23
1.93
14210--14374
83
2.0
83
89
2
251
36
15
21
25
1.93
14666--14781
57
2.0
57
94
0
205
40
17
18
23
1.91
17298--17350
17
3.2
17
79
10
56
56
1
1
39
1.21
17827--17864
19
2.0
20
89
5
60
63
0
0
36
0.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26384--26516
67
2.0
67
98
0
257
45
14
6
33
1.71
26809--26982
89
2.0
88
79
5
190
33
6
5
54
1.49

Tables:   1

The End!