Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01006372.1 Kokia drynarioides strain JFW-HI SEQ_120948, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  91575

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7945--8034
47
1.9
46
88
6
137
16
3
18
61
1.48
8158--8225
31
2.2
29
85
12
84
25
11
19
44
1.84
12032--12070
20
2.0
20
84
0
51
41
0
2
56
1.13
13698--13766
28
2.3
30
80
9
79
42
4
8
44
1.55
19592--19624
16
2.1
16
100
0
66
27
18
12
42
1.85
40317--40345
14
2.0
15
93
6
51
17
0
34
48
1.47
45328--45354
2
13.5
2
100
0
54
48
0
0
51
1.00
53271--53356
43
2.0
43
82
6
104
51
12
16
19
1.76
59917--59968
27
2.0
26
84
3
68
23
11
7
57
1.59
60940--60993
24
2.2
24
83
3
63
48
1
5
44
1.37
61907--61963
25
2.2
25
87
3
78
47
0
0
52
1.00
62621--62679
31
1.9
30
86
10
84
30
13
11
44
1.80
67413--67463
24
2.1
24
92
0
84
25
5
5
62
1.41
67429--67475
24
2.0
24
86
0
67
25
10
8
55
1.62
69343--69393
24
2.1
24
96
0
93
25
11
5
56
1.57
74269--74304
16
2.2
16
100
0
72
41
11
5
41
1.64
74664--74699
12
3.0
12
84
15
56
2
13
58
25
1.49
76905--76932
6
4.7
6
100
0
56
50
0
35
14
1.43
78068--78097
15
1.9
16
93
6
53
43
0
0
56
0.99
79496--79651
81
1.9
81
86
2
224
42
4
7
45
1.53
79496--79688
81
2.4
81
79
8
223
41
4
8
45
1.55
80886--80956
20
3.5
20
76
14
83
52
0
0
47
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
80879--80956
11
7.6
11
76
21
64
52
0
1
46
1.08
82049--82146
20
4.9
19
68
17
65
46
2
1
50
1.19
82057--82137
31
2.7
29
87
7
117
48
1
1
49
1.17
89751--89799
18
2.5
20
77
12
57
40
8
6
44
1.59
89927--89974
17
2.8
16
82
17
53
77
4
0
18
0.93
89932--89988
27
2.1
28
83
9
73
78
5
1
14
0.99
91434--91476
21
2.1
21
86
4
61
25
2
13
58
1.48

Tables:   1

The End!